LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo8g00090	ATGTCTATCGTGCCATTACCCTCAAACCTTGGGGTTGTTGATGGAAGCCCTGAATGGTTGAGTAGAGCAGATAATGCATGGCAGCTAGTAGCTGCAACCCTAGTGGGTATGCAAAGTGTTCCAGGGCTCATAATATTGTATGGTGGAGCAGTGAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCACTCTATGCTTTTGCATGTGTGTTCTTCTGTTGGGTTGTGTGGGGATACAGAATGTCTTTTGGTGATGAGCTTGTTCCTTTCTGGGGAAAGCCTGCCATGTCACTGGAACATGCTTATCTTTTCAAGAAAGCCTTTTTGGGGGCATTCCCAAATGCCACAATGGTGTATTTCCAGTGTGTCTTTGCTGCCATTACTCTGATTCTCATTGCTGGGGCTGTGTTGGGGCGCATGAACTTCTATGCTTGGATGTTGTTTGTGCCTTTGTGGCTCACATTCTCATACACCTTCACAGCTTTCAGCATATGGAGTACTAGTGGCTTTTTGGCCAAAATGGGGATAATAGACTACTCAGGGGGATATGTGATCCATTTGTCTTCTGGGGTTGCAGGATTCACAGCTGCATATTGGGTTGGACCACGGCTAAACAAGGACAGGGAAAGGTTCCCTCCAAACAACATCCTTCTTATGCTGGCAGGAGCAGGGCTGCTGTGGATGGGGTGGACGGGCTTCAACGGGGGAGATCCGTACATAGTAAACTCTGATGCTTCCCTGGCCGTCCTCAACACCCATGCTTGCACTGCTACCAGCTTGCTCACTTGGGTCATCCTTGATGTCCTCTTTTTCAAAAAGCCTTCTGTCATTGGAGCTGTTCAAGGCATGATCACTGGTTTGGTCTGCATAACCCCTGCAGCAGGAGTTGTGCAGGGATGGGCAGCACTTATAATGGGAGTGTTGTCAGGCTCAATTCCTTGGTTCACCATGATGGTGATCCACAAGAGATCAAAACTACTGCAGAAGGTTGATGATACAATGGCTGTGTTCCACACTCATGCCATTGCAGGAACCCTAGGAGGACTCCTCACTGGACTCTTTGCTGATCCAAGGCTCAACAGAATGTTCTATGGAGTTCCCGGTCAATACGTTGGTTTCTTTTACGGTTTCGGTTCGAGCATGGTCAGAACCGGGTTCAGGCAAATGGGAGTCCAAATCCTTGGGATTATCTTCGTTATCTTTGTCAATGTTATCAGCACAAGCTTGATTTGCCTCTTCATTCGAATTTTTGTTCCATTGAGAATGTCTGAAGAGGATATGGAGATAGGTGATGAGGCTGCTCATGGGGAAGAAGCTTATGCCATCTGGGGTCAGGGTGATAAGCTTGAAAACTCAAGTTCAAAGTATGGAAGTTCATTATATGATGATGTTGAAGCTGGGGCACCCAAGAAGAAGCGTGGTGGCACGGTTGAGATGATGTCCAACTAA	1449	0.4714	MSIVPLPSNLGVVDGSPEWLSRADNAWQLVAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDELVPFWGKPAMSLEHAYLFKKAFLGAFPNATMVYFQCVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSTSGFLAKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYIVNSDASLAVLNTHACTATSLLTWVILDVLFFKKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGVLSGSIPWFTMMVIHKRSKLLQKVDDTMAVFHTHAIAGTLGGLLTGLFADPRLNRMFYGVPGQYVGFFYGFGSSMVRTGFRQMGVQILGIIFVIFVNVISTSLICLFIRIFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVEAGAPKKKRGGTVEMMSN	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo8g00090	482	PRINTS	Rhesus blood group protein signature	248	270	IPR002229	GO:0005886
	Pumo8g00090	482	PRINTS	Rhesus blood group protein signature	121	137	IPR002229	GO:0005886
	Pumo8g00090	482	PRINTS	Rhesus blood group protein signature	217	235	IPR002229	GO:0005886
	Pumo8g00090	482	Gene3D	Ammonium transporter AmtB like domains	11	444	IPR029020	-
	Pumo8g00090	482	NCBIfam	ammonium transporter	24	440	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Pumo8g00090	482	PANTHER	AMMONIUM TRANSPORTER MEP2	12	452	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Pumo8g00090	482	MobiDBLite	consensus disorder prediction	453	482	-	-
	Pumo8g00090	482	Pfam	Ammonium Transporter Family	26	440	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Pumo8g00090	482	SUPERFAMILY	Ammonium transporter	19	422	-	-
	Pumo8g00090	482	FunFam	Ammonium transporter	9	443	-	-
	Pumo8g00090	482	ProSitePatterns	Ammonium transporters signature.	178	203	IPR018047	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo8g00090	Pumo-Chr8	2265419	2269558	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo8g00090	115	474	Inorganic Solute Cotransporters	AT2G38290	61.667	2.97e-147	423

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo8g00090	K03320		-	gmx:100787856	922.154