Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00087 ATGAGTTCCAATTCCAAACAGAATCAAGTTCCTACAGAGGCCAATGATGCTTACCTGTCTGCTGTGTTACTTTCTTTTAGCCGGGTTTTCCCAGCAATCCTAAATGCTGCTATTGATCTCAATTTGTTTGATATCATAGCTAAGGCACAAAGTTCATGTAATTCAAGTTTATCTGCCTCTGAAATTGCTTCTTTGTTTCCAAATCAACACCCACAATTGGCTAATAGGCTTGAACGCATATTACCATTGTTGGCCAGTTATTCTCTTCTAAATTGCACCATTCGCACAAATGAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCTCACCCGTTGGTCAATACTTTGCATTTGATAGTGAAGGAAGCTCTTTGTCTCCTCTCTCAACTTTAGTACATAGCGGATATCATGACCTTTGGAAGGACGTGAAGGATGCAATTGTGGACCCTAATTGCAATAACTACTTTGAAAATGTCTATGGAATGCCGTCATTTCAATATATGGAGAGAAATACAGAGCTGAATCAGATTTTTTACAACGCAATGGCTCACGTTGGCCCATTAGACCTGAAAAACGTGCTCAAATCATATGAAGGATTTGAGAGTGTGTCAACACTGGTTGATGTAGGAGGTGGAGTAGGAGAAACCTTGAAACAAATTGTCTCTGCATATCCTTCAATTAAAGGAATTAATTTTGATTTGCCTCAGATGATTCAAAATGCACCACCTCATCCAGGTATAGAGCATATTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTACTAAAGTTTGTATGTCATAATTGGCCAGATGAAGACTGTATAAAATTTTTAAGAAATTGTCATACAGCTTTGCCACAACATGGAAAAGTGATTGTTTTGGACTATATCATTCCAGAGGTCCCAAATTCAAGTGATATATCTAAGGGAACTTGTGCTATCGACAATCTCATGTTTTTAGCACATGGTGGAAAGGAAAGAACTGAGAATGATTTTGAGAACTTGTGCAAGAGCTCTGGTTTTCCCAAGTTTCATGTTGCAAGTAGTGACATCTCAGCTACGCTAGGAGTGATAGAATTCTATAAATAG 1098 0.3825 MSSNSKQNQVPTEANDAYLSAVLLSFSRVFPAILNAAIDLNLFDIIAKAQSSCNSSLSASEIASLFPNQHPQLANRLERILPLLASYSLLNCTIRTNEDGKRERVYALSPVGQYFAFDSEGSSLSPLSTLVHSGYHDLWKDVKDAIVDPNCNNYFENVYGMPSFQYMERNTELNQIFYNAMAHVGPLDLKNVLKSYEGFESVSTLVDVGGGVGETLKQIVSAYPSIKGINFDLPQMIQNAPPHPGIEHIGGDMFESVPTGDAILLKFVCHNWPDEDCIKFLRNCHTALPQHGKVIVLDYIIPEVPNSSDISKGTCAIDNLMFLAHGGKERTENDFENLCKSSGFPKFHVASSDISATLGVIEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00087 365 Pfam Dimerisation domain 33 85 IPR012967 GO:0046983
Pumo8g00087 365 FunFam Caffeic acid 3-O-methyltransferase 2 115 - -
Pumo8g00087 365 Gene3D Vaccinia Virus protein VP39 117 365 IPR029063 -
Pumo8g00087 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 365 IPR016461 GO:0008168
Pumo8g00087 365 Pfam O-methyltransferase domain 139 344 IPR001077 GO:0008171
Pumo8g00087 365 FunFam Uncharacterized protein 116 365 - -
Pumo8g00087 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 351 IPR029063 -
Pumo8g00087 365 CDD AdoMet_MTases 204 301 - -
Pumo8g00087 365 PANTHER O-METHYLTRANSFERASE 24 353 IPR016461 GO:0008168
Pumo8g00087 365 SUPERFAMILY "Winged helix" DNA-binding domain 14 118 IPR036390 -
Pumo8g00087 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Pumo8g00087 365 Gene3D - 1 115 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00087 Pumo-Chr8 2164190 2166132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00087 1 365 Monolignol Biosynthesis Gene Families AT5G54160 44.267 3.71e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00087 - - gmx:106794104 585.489