Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00086 ATGAGTTCCAATTCCAAAGAGAGTCAAGTTCCCCAAGAGGTAGCAAAGGTGGACGATGCTTACCCCTTTGCTATGTTACTCTGTTTTAGCCGGGTCCTCCCTGCGGTTCTAAATGCTGCTGTTGATCTCAATTTGTTTGATATCATAGCAAAGGCAGAGAGTTCAACCTTATCTGCCTCTGAAATTGCTTCTTTGCTTCCAAATCAACACCCACATTTGGCTAATAGGCTTGAACGCATGCTACCTTTGTTGGCCAGTTACTCTCTTCTAAATTGCACCATTCGCACCAATGAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCTTACCCGTTGGCCAATACTTTGCATTTGATAATGAAGGAATCTCCTTGGCTCCTCTCTCAACTTTAATACATCGAGGATTTCATGACATTTGGAAGGATGTAAAGGATGCGATTGTGCATCCTAACAACCATAACCATTTTGAAAATGTCCACGGAATACCATCATATGATTATATGGAGAAAAATGCAGAGCTAAATCACATTTTTTACAAAGCAGTAACTCACGCTGCCCCACTAGAACTGAAAAGGGCACTCAAATTATATAAAGGATTTGAGGGAGTGTCAACACTGGTTGATGTAGGAGGTGGTGTAGGAGATACCTTGAAACAGATTCTCCTTTCATATCCTTCAATTAAAGGAATTAATTTTGATTTGCCTCAGATGATTCAGAATGCACCACCTCTTCCAGGTATAGAGCATATTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTACTGAAGTTTGTATGTCACAATTGGCCAGATGAAGATTGTATAAAGTTTTTAAGAAATTGTCACAAAGCTTTGCCACAACATGGAAAAGTTGTTGTTTTTGAATATATAATTCCAGAAGTCCCGAACCCAAGCTATATATCTAAGCATACTTGTACTCTCGACAATCTCATGTTTTTAGCACATGGTGGAAGGGAAAGAACTCAGAATGAATTTGAGAAGTTGTGCAAGAGCTCTGGTTTTTCCAAGTTTCATGTTGCAAGTAGTGACATCTCATCTACGCTAGGAGTGATGGAATTCTATAAATAG 1098 0.3934 MSSNSKESQVPQEVAKVDDAYPFAMLLCFSRVLPAVLNAAVDLNLFDIIAKAESSTLSASEIASLLPNQHPHLANRLERMLPLLASYSLLNCTIRTNEDGKRERVYALLPVGQYFAFDNEGISLAPLSTLIHRGFHDIWKDVKDAIVHPNNHNHFENVHGIPSYDYMEKNAELNHIFYKAVTHAAPLELKRALKLYKGFEGVSTLVDVGGGVGDTLKQILLSYPSIKGINFDLPQMIQNAPPLPGIEHIGGDMFESVPTGDAILLKFVCHNWPDEDCIKFLRNCHKALPQHGKVVVFEYIIPEVPNPSYISKHTCTLDNLMFLAHGGRERTQNEFEKLCKSSGFSKFHVASSDISSTLGVMEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00086 365 FunFam Uncharacterized protein 116 365 - -
Pumo8g00086 365 PANTHER O-METHYLTRANSFERASE 27 353 IPR016461 GO:0008168
Pumo8g00086 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Pumo8g00086 365 Gene3D Vaccinia Virus protein VP39 119 365 IPR029063 -
Pumo8g00086 365 Pfam Dimerisation domain 36 85 IPR012967 GO:0046983
Pumo8g00086 365 FunFam Caffeic acid 3-O-methyltransferase 2 115 - -
Pumo8g00086 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 365 IPR016461 GO:0008168
Pumo8g00086 365 Gene3D - 2 115 IPR036388 -
Pumo8g00086 365 CDD AdoMet_MTases 204 296 - -
Pumo8g00086 365 Pfam O-methyltransferase domain 139 345 IPR001077 GO:0008171
Pumo8g00086 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 351 IPR029063 -
Pumo8g00086 365 SUPERFAMILY "Winged helix" DNA-binding domain 18 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00086 Pumo-Chr8 2148561 2150189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00086 1 349 Monolignol Biosynthesis Gene Families AT5G54160 43.750 2.23e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00086 - - gmx:106794104 633.254