Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00085 ATGGGTTCCAATTCCAAAGAGAGTCAAGTTCCCCAAGAAGTAACAAAGGTCCACGATGCTTCCCTCTCTGCTGTGTTACTTTGTTTTAGCAGGGTCTTCCCTGCAATTCTAAATGCTGCTATTGATCTCAATTTGTTTGATATCATAGCCAAGGCAGAGAGTTCAACTTTATCTGCCTCTGAAATTGCTTCTTTGCTTCCAAATCAACACCCACAATTGGCTAACAGGCTTGCACGCATGTTACCATTGTTGGCTAGTTATTCTCTTCTAAATTGCACCATTCGCACCAATGAAGATGGTAAGAGAGAAAGAGTTTATTCTCTCTCACCCGTTGGTGAATACTTTGCATTTGATAAGGATGAAGGAAGCTCCATGTCTCCTATGTCATCTTTAATACACCGCGGATTTCATGACCTTTGGAAGGATGTAAAGGATGCAATTGTGGACCCTGACAACGATAACCATTTTGAACATGTTCATGAAATGTCATCATATGATTACATGGAGAAAAATACAGAGCTGAGTCACATTTTTTACAAGGCAGTAACTCACGCTGCCCCAGTAGAACTGAAAAGGGCACTCAAATTATACAAAGGATTTGAGGGAGTGTCAACACTAGTTGATGTAGGAGGTGGAGTTGGAGAGACCCTGAAACAGATTCTCCCTGCTTATCCTTCAATGAAAGGAATTAACTTTGATTTGCCTCCGGTGATTGAAAAAGCACAACCTCATCCAGGCATAAAGCATATTGGAGGAGATATGTTTGAAAGTGTTCCAAGTGGTGATGCCATTTTACTACAGTTTGTATGTCACAATTGGCGAGATGAAGATTGTATAAAGTTTTTAAGAAATTGTCACAAAGCTTTGCCACAACATGGAAAAGTTGTTGTTTTCGAATATATAATTCCAGAAGTCCCGAATCCAAGCTATATATCCAAGCATACTTGTACTCTGGACAATCTCATGTTTTTAGCACATGATGGAAAGGAAAGAACTGAGAATGAATTTGAGAACTTGTGCAAGAGCTCTGGTTTTTCCAAGTTTCATGTTGCAAGTAGTGACATCTCATCTACGCTAGGAGTGATGGAATTCTATAAATAG 1101 0.396 MGSNSKESQVPQEVTKVHDASLSAVLLCFSRVFPAILNAAIDLNLFDIIAKAESSTLSASEIASLLPNQHPQLANRLARMLPLLASYSLLNCTIRTNEDGKRERVYSLSPVGEYFAFDKDEGSSMSPMSSLIHRGFHDLWKDVKDAIVDPDNDNHFEHVHEMSSYDYMEKNTELSHIFYKAVTHAAPVELKRALKLYKGFEGVSTLVDVGGGVGETLKQILPAYPSMKGINFDLPPVIEKAQPHPGIKHIGGDMFESVPSGDAILLQFVCHNWRDEDCIKFLRNCHKALPQHGKVVVFEYIIPEVPNPSYISKHTCTLDNLMFLAHDGKERTENEFENLCKSSGFSKFHVASSDISSTLGVMEFYK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00085 366 PIRSF O-mtase 1 366 IPR016461 GO:0008168
Pumo8g00085 366 SUPERFAMILY "Winged helix" DNA-binding domain 18 118 IPR036390 -
Pumo8g00085 366 Pfam Dimerisation domain 36 85 IPR012967 GO:0046983
Pumo8g00085 366 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Pumo8g00085 366 PANTHER O-METHYLTRANSFERASE 29 354 IPR016461 GO:0008168
Pumo8g00085 366 Pfam O-methyltransferase domain 140 346 IPR001077 GO:0008171
Pumo8g00085 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 352 IPR029063 -
Pumo8g00085 366 Gene3D - 2 115 IPR036388 -
Pumo8g00085 366 FunFam Uncharacterized protein 117 366 - -
Pumo8g00085 366 CDD AdoMet_MTases 205 297 - -
Pumo8g00085 366 Gene3D Vaccinia Virus protein VP39 117 366 IPR029063 -
Pumo8g00085 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00085 Pumo-Chr8 2111741 2131227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00085 1 350 Monolignol Biosynthesis Gene Families AT5G54160 43.626 3.01e-98 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00085 - - gmx:106794104 638.647