Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00084 ATGAGTTCCATTAATATTTCCAATTCCAAACAAAATCAGCTTCTTCCCACAGAGGAAGCAAAGGAGGATGACACTAATTACCTCTCAGCTATTATACTATGTTTTAGCCGAATTTTTCCTGCAATCTTGAATGCTGCTGTTGATCTCAATTTGTTTGATATAATAGCAAAGGCAGAGAGTTCAACTTTATCTGCCTCTGAGATTGCTTCTTTGCTTCCAAATCCACACCCACAATTGGCTAATAGGCTTGAACGCATATTGCCTGTGTTGGCCAGTTACTCTCTTCTGAATTGTTCCATTCGCACCAATGAAGATGGTGTGAGAGAGAGAGCTTATGCTCTCTCACCCGTTGGTCAATACTTTGCATGTGATCACGATGGAGGCTCTTTGGGTCCACTCTCAAGTTTATTTCATCGTGGATATTTTCACGTCTTCAAGGACGTAAAGGATGCAATTATGGACCCAAATAACAACGATCATTTCCAAAAAGTCCATGGAATGCCGCCTTATCAATATATGAAGACAGACGAAGAACTTAATCAACTTTTTAATAAAGCTTTGGCCCAAACTGGCCCACCTGCAATGAAAATGCTCCTTAAACTATATAAAGGATTTGAGCAAGTATCAACACTGGTTGATGTAGGTGGTGGAATAGGCGAGACCTTGAAACAGATTATCTCTGAGTACCCTTCAATTAAAGGAATTAATTTTGATTTGCCTCAAGTGATACAAGATGCACCACCCTATCCAGGGATAGAACATGTTGAAGGAGATATGTTTGAAAGTGTTCCAAAGGGTGATGCCATTTTACTAAAGCTTGTATGTCATAATTGGTTAGATGAAGACTGTGTAAAGTTTTTAAGGAATTGCCACAAAGCTTTGCCACAACATGGGAAGGTGATTGTTATAGACTATATAATTCCAGAAGTTCCGGATTCAAGCAAAATTTCTATGCAAACTTGTGTTGCTGATAGTCTCATGTTTTTAGTAACAAGTGGAAAGGAAAGAACTGAGAAAGAATTTGAGAGCTTGTGCGGGAATTCTGGATTTTCTAGATTTCATGTTGCATGTAGAGATTCACCGTCGGTTCTTTCAGTGATGGAATTTTATAAGTAA 1116 0.3862 MSSINISNSKQNQLLPTEEAKEDDTNYLSAIILCFSRIFPAILNAAVDLNLFDIIAKAESSTLSASEIASLLPNPHPQLANRLERILPVLASYSLLNCSIRTNEDGVRERAYALSPVGQYFACDHDGGSLGPLSSLFHRGYFHVFKDVKDAIMDPNNNDHFQKVHGMPPYQYMKTDEELNQLFNKALAQTGPPAMKMLLKLYKGFEQVSTLVDVGGGIGETLKQIISEYPSIKGINFDLPQVIQDAPPYPGIEHVEGDMFESVPKGDAILLKLVCHNWLDEDCVKFLRNCHKALPQHGKVIVIDYIIPEVPDSSKISMQTCVADSLMFLVTSGKERTEKEFESLCGNSGFSRFHVACRDSPSVLSVMEFYK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00084 371 CDD AdoMet_MTases 210 307 - -
Pumo8g00084 371 FunFam Uncharacterized protein 122 371 - -
Pumo8g00084 371 Pfam O-methyltransferase domain 145 351 IPR001077 GO:0008171
Pumo8g00084 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 365 IPR029063 -
Pumo8g00084 371 FunFam Caffeic acid O-methyltransferase 38 181 - -
Pumo8g00084 371 Gene3D Vaccinia Virus protein VP39 180 358 IPR029063 -
Pumo8g00084 371 PANTHER O-METHYLTRANSFERASE 36 359 IPR016461 GO:0008168
Pumo8g00084 371 Gene3D - 38 198 IPR036388 -
Pumo8g00084 371 Pfam Dimerisation domain 42 91 IPR012967 GO:0046983
Pumo8g00084 371 PIRSF O-mtase 7 371 IPR016461 GO:0008168
Pumo8g00084 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 371 IPR016461 GO:0008168
Pumo8g00084 371 SUPERFAMILY "Winged helix" DNA-binding domain 22 125 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00084 Pumo-Chr8 2083701 2086668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00084 6 357 Monolignol Biosynthesis Gene Families AT5G54160 46.518 1.72e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00084 - - gmx:100793053 696.427