Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00067 ATGGAGGTTGTTGGGATCAACTCTAATGAGCAGGATGCTATATTTCGAATAGTAGCCGCAGTACTTCATTTGGGAAACATTGAATTTGTTAAGGGAGGAGACGAGGAAATGGATTCTTCTCAACCCAAGGGTGAAAAATCCCATTTCCACCTTAAAACTGCAGCTGAGCTTTTGATGTGTGATGAGAAGTCCCTTGAAGACTCTTTCTGCAAACGTGTTATGGTGACTCGTGGTGACACCATAACAAAATCGCTTGATCCAAATGCTGCAGCTCTCAGTAGGGATGCATTGGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATTGTGGACAAGATAAACAACTCTATTGGGCAAGATCCAGATTCAAAGAACTTGATTGGGGTTCTAGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAACAATTTTGTATCAATTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATTGAGTTTGTTGATAATCAAGACGTACTTGATCTCATAGAGAAGAAACCCGGTGGCATTATTGCTCTCCTGGATGAGGCCTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATATCAAACCTTTAAAGACAACAAACGCTTCAGCAAACCAAAGTTGTCTCGCACTGACTTCACCATTAACCACTATGCCGGTGACGTCACTTATCAAACTGATTTTTTCCTCGATAAAAATAAAGACTATGTTGTTCCAGAGCATGCTGCTCTACTCAGCGCTTCAAAGTGCCCCTTTGTTTCAGGGCTATTCCCACCTTTACCTGAGGAAACTACAAAATCGACGAAGTTCTCTTCTATAGCCACTCAGTTTAAGCTGCAACTGCAATCTTTGCTTGAAACATTAAATGCTACCGAGCCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTGAAGCCAGGGATATTCGAGAACAATAATGTGTTGCAGCAGCTTCGATGTGGAGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGAAAGAACTTTGATGAATTTGTTCAGCGGTTTACTATCCTGGAACCTAAGGTTCTGAAAGCATGCCCTGATGAGATGACTGCTTGCAAGAGGCTTCTAGATAGAGCGAACCTTAAAGATTATCAGATTGGAAAGACAAAAGTGTTTCTAAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCTTGGGAAGATCTGCAAGCATTATTCAGAGAAAAGTCCGCATGTTTATTTGTCGAAAACAGTTCATTTTATTACAATTGTCTGCCATAGAACTTCAAAGGGTTGCTAGAGGCCAACTTGCACGACATCAGTATGAATGCATGAGGAGGGAAGCTGCTTCTTTGAAAATTCAGAAAGACTTTCGGATGTATATTTCCAGAAATGCTTACAAAACTATTTATGCCTCGGCTATTGATATTCAAACTGGTATGCGAGGGATGGCTGCTAGAAATGACCTTAGATTCAGGAAACGAACACAAGCTGCGATTGTTATTCAGGGTCACTACAGAGGTTATTCAGGCCGTACTTATTACAAGAAGCTAAAGAAAGCAGCAATTGCTGCACAGTGTTCCTGGAGGAGAACATTGGCACGTAGAGAACTTCGAAAGCTTAAAATGGCTGCCAAGGAAGCCAAGGCACTTGAAGCTGCAAAAAATAATCTAGAAATGCAAGTCAAAGAATTAACTTTGTGTCTAGAAACAGAGAAGAGAATGAGGGAAGCCAAGACACTGGAAAATGAAAAACTACAGCATGCTTTGCAAGAGATGGAGCTTCAGGTCCAAGAAATTGAGGAAGCCAAGAAACAGGAAAATGAAAAACTACAACATGCTTTGCAAGAGAAGGAGCTTCAGTTCCAAGAAATTGAGGAAGCCAAGAAACAAGAAAATGAAAAATTACAACATGCTTTGCAAGAGGTGGAGCTTCAGTTCCAAGAAACTAAGGCAGCACTCATTCAAGAACGGGAGGCTGCCAAGAAAGTAGCTGAGCAAACTCCAACTACACAGGAGAATTCTGTTAATGTTGTTGACATTGAATTGATCAATAAGCTTACCACAGAAAATGAAAAACTCAAGGAACTGGTTAATTCGTTGGAAAAGAAACCTGTACAGGAGTTTCCTGTTAATGTTACTGACAATGAGTTGATCAATAAACTTTCTTCCGAAAATGAACAGCTGAAGGAACAGATTAATTCATCGGAAAAGAAAACTGTACAAGAGTTTCCTGTTAATGTTACCGACAATGAGGTGATCAGTAAGCTAACTACAGAAAATGAACATCTTAAGGATCAAGTTAATTCATTGGAAAGAAAAATTGATGAAGCAGAGAGGAAATATGAAGAAAGTAACAAGCTTAGTGAGGAGCGCATGAGTCAAATTATAGAAACAGAATCAAAGATGATTGATATAAAGACAAATATGCAGAGACTTGAAGAAAAACTATCTGATATGGAAACTGAGAATCAAGTTTTGCGACAGCAAGCCTTGTTGAGTTCATCATCCAGGAAAATGTCAGGAATTGCGCCTACCACAACTCCGCCTTTGGAAAATGGTCATCAGGCACCACAGGGTTCTGTTCCTGCAAAAACATTTGGTTCAGAGGATAGTAAAGTAAGGAGATCTATTATGGAGAGGCATCAAGAGAGTGTAGATGCTCTTTTCAAATGTGTGACAAAAGATCTTGGGTTCTGTGAAGGAAAACCTGTTGCAGCATTTACCCTTTACAATTGTCTGCTACATTGGAAATCTTTTGAAGCAGAAAAAACAAGCATATTTGATCGTCTTATTCAGCTGATTGGTTCTGAATTAGAGGATCCGGACAAAAATGATTGTATGGCTTATTGGCTATCCAACACATCTTCTTTGTTTTTTCATCTTCAGCGATGTTTAAGAGTACCTACAGCACGAAAACCACCCACTCCAACATCATTTTTTGGGAGGATGACCCAGGGTTTCCGCTCTTCTAATAGTCTTTCCAGCAGTGCTTTTGATGTAGTGCAACAGGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAACAACTTGCAGCTTATGTGGAAAAGATATATGGAATCGTTCGAGAAAATTTTAAGAAAGAGTTGTCACCTCTACTTTCTTCTTGCATTAAGGCGGACAAAACATCAAATGACAACATCCAATCAGTTGGTTCTTGGACTAGCATTATTGAATGCCTTAATAGATATCTCAAGATTCTGAAAGAAAACTATGTGCCTTCTGTTCTAGTTCAGAAGCTATATAATCAAATTTTTCAATACATCAATGTAGAACTCTTTAATAGCCTTGTTTTACATCGAGAATGTTGCACATTCAAAAATGGAGAATATATAAAATCAGGGTTGGCTGAACTAGAACTATGGTGTACTGAAGCAACGGAAGAGTATGTTGGCTCATCTTTGGATGAACTCAAACATGCAAAGCAAGCAGTTAGATTCTTGGTTGCACCACAGAAGGAAGAGCTATCCTATGATGATCTTACAAATGACCTCTGCCCTGTCCTGAGTGCTCAACAACTTTATAGAATATGTACACTTTACAATGATGATGATGAAAATAAACAAAGTGTATCATCAGATGTCACTACTAGATTGAAGCTTCTAATGACAGATGATGTAGAAGAAGATGACAAATCTTTCTTGTTGGAGGACAACACAAGTCATCCTATTATCGTTGAAGAGATCTCTACTTCTGCTCTAGATAAGACCATTCCAAAAATAAAACCTCCTGCAGAACTTCTTGAGAATGCAAACTTCCAATTTTTACATGATTATTGTTAG 3903 0.3889 MEVVGINSNEQDAIFRIVAAVLHLGNIEFVKGGDEEMDSSQPKGEKSHFHLKTAAELLMCDEKSLEDSFCKRVMVTRGDTITKSLDPNAAALSRDALAKIVYSRLFDWIVDKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTINHYAGDVTYQTDFFLDKNKDYVVPEHAALLSASKCPFVSGLFPPLPEETTKSTKFSSIATQFKLQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKNFDEFVQRFTILEPKVLKACPDEMTACKRLLDRANLKDYQIGKTKVFLRAGQMAELDACRAEVLGRSASIIQRKVRMFICRKQFILLQLSAIELQRVARGQLARHQYECMRREAASLKIQKDFRMYISRNAYKTIYASAIDIQTGMRGMAARNDLRFRKRTQAAIVIQGHYRGYSGRTYYKKLKKAAIAAQCSWRRTLARRELRKLKMAAKEAKALEAAKNNLEMQVKELTLCLETEKRMREAKTLENEKLQHALQEMELQVQEIEEAKKQENEKLQHALQEKELQFQEIEEAKKQENEKLQHALQEVELQFQETKAALIQEREAAKKVAEQTPTTQENSVNVVDIELINKLTTENEKLKELVNSLEKKPVQEFPVNVTDNELINKLSSENEQLKEQINSSEKKTVQEFPVNVTDNEVISKLTTENEHLKDQVNSLERKIDEAERKYEESNKLSEERMSQIIETESKMIDIKTNMQRLEEKLSDMETENQVLRQQALLSSSSRKMSGIAPTTTPPLENGHQAPQGSVPAKTFGSEDSKVRRSIMERHQESVDALFKCVTKDLGFCEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQLIGSELEDPDKNDCMAYWLSNTSSLFFHLQRCLRVPTARKPPTPTSFFGRMTQGFRSSNSLSSSAFDVVQQVDAKYPALLFKQQLAAYVEKIYGIVRENFKKELSPLLSSCIKADKTSNDNIQSVGSWTSIIECLNRYLKILKENYVPSVLVQKLYNQIFQYINVELFNSLVLHRECCTFKNGEYIKSGLAELELWCTEATEEYVGSSLDELKHAKQAVRFLVAPQKEELSYDDLTNDLCPVLSAQQLYRICTLYNDDDENKQSVSSDVTTRLKLLMTDDVEEDDKSFLLEDNTSHPIIVEEISTSALDKTIPKIKPPAELLENANFQFLHDYC 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00067 1300 CDD MyosinXI_CBD 913 1267 IPR037975 GO:0007015
Pumo8g00067 1300 Pfam IQ calmodulin-binding motif 553 572 IPR000048 GO:0005515
Pumo8g00067 1300 Pfam IQ calmodulin-binding motif 482 501 IPR000048 GO:0005515
Pumo8g00067 1300 Pfam IQ calmodulin-binding motif 458 475 IPR000048 GO:0005515
Pumo8g00067 1300 Pfam IQ calmodulin-binding motif 434 452 IPR000048 GO:0005515
Pumo8g00067 1300 Pfam IQ calmodulin-binding motif 529 549 IPR000048 GO:0005515
Pumo8g00067 1300 Gene3D - 530 580 - -
Pumo8g00067 1300 Gene3D - 432 482 - -
Pumo8g00067 1300 Gene3D - 483 529 - -
Pumo8g00067 1300 ProSiteProfiles IQ motif profile. 505 532 IPR000048 GO:0005515
Pumo8g00067 1300 PANTHER MYOSIN 1 1233 - -
Pumo8g00067 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 483 IPR027417 -
Pumo8g00067 1300 ProSiteProfiles IQ motif profile. 480 509 IPR000048 GO:0005515
Pumo8g00067 1300 SMART MYSc_2a 1 430 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00067 1300 Coils Coil 609 693 - -
Pumo8g00067 1300 Coils Coil 787 863 - -
Pumo8g00067 1300 FunFam unconventional myosin-Va 482 530 - -
Pumo8g00067 1300 FunFam unconventional myosin-Va 531 578 - -
Pumo8g00067 1300 Gene3D Myosin VI head, motor domain, U50 subdomain 7 298 - -
Pumo8g00067 1300 SMART DIL_2 1120 1227 IPR002710 -
Pumo8g00067 1300 PRINTS Myosin heavy chain signature 179 207 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00067 1300 PRINTS Myosin heavy chain signature 126 154 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00067 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 579 IPR027417 -
Pumo8g00067 1300 ProSiteProfiles IQ motif profile. 528 557 IPR000048 GO:0005515
Pumo8g00067 1300 FunFam Class V myosin 136 273 - -
Pumo8g00067 1300 ProSiteProfiles IQ motif profile. 551 580 IPR000048 GO:0005515
Pumo8g00067 1300 Pfam Myosin head (motor domain) 1 417 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00067 1300 Pfam DIL domain 1121 1224 IPR002710 -
Pumo8g00067 1300 Gene3D - 136 320 - -
Pumo8g00067 1300 Coils Coil 717 737 - -
Pumo8g00067 1300 ProSiteProfiles Myosin motor domain profile. 1 429 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00067 1300 Coils Coil 564 601 - -
Pumo8g00067 1300 ProSiteProfiles Dilute domain profile. 962 1245 IPR002710 -
Pumo8g00067 1300 Gene3D Kinesin motor domain 120 359 IPR036961 -
Pumo8g00067 1300 MobiDBLite consensus disorder prediction 870 899 - -
Pumo8g00067 1300 SMART iq_5 479 501 IPR000048 GO:0005515
Pumo8g00067 1300 SMART iq_5 431 453 IPR000048 GO:0005515
Pumo8g00067 1300 SMART iq_5 502 524 IPR000048 GO:0005515
Pumo8g00067 1300 SMART iq_5 454 476 IPR000048 GO:0005515
Pumo8g00067 1300 SMART iq_5 527 549 IPR000048 GO:0005515
Pumo8g00067 1300 SMART iq_5 550 572 IPR000048 GO:0005515
Pumo8g00067 1300 Gene3D - 364 427 - -
Pumo8g00067 1300 ProSiteProfiles IQ motif profile. 455 484 IPR000048 GO:0005515
Pumo8g00067 1300 Coils Coil 745 772 - -
Pumo8g00067 1300 MobiDBLite consensus disorder prediction 870 903 - -
Pumo8g00067 1300 FunFam Myosin 2 7 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00067 Pumo-Chr8 1889098 1910720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00067 1 1298 Myosins gene family AT1G04600 54.254 0.0 1417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00067 K10357 - gmx:100788123 2285.76