Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00052 ATGGATGCTGAGCACCTTGAGAGTAGTGTTATATCTGGGTTCCAATTGGCCACTTCAGCTGGACCCTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAGGCACGCTTATCTCCATTTTCAGGGCAGCATGATGAATCTGAAACGCACCAACAATCTGAGCAGTACGGCATCTTTGCAGGGCAGGTAATTGCAACTGTCAAAGATGCTTGTAGAGCAGCTGTGCTTCAGAATCAGCCACGGCTGGTGGAAGCAATGTATTTTTGTGAGTTGAATACACCTACTGAATATTTGGGTCCCATGTATGCTGTACTTTCCCGAAGACGGGCCCGAGTTTTGAAGGAAGAGATGCAAGAAGGTTCCCCTTTCTTCACTGTGCATGCATATCTTCCTGTTTCTGAGAGCTTTGGTTTTGCTGATGAGCTTAGAAGGTGGACTTCTGGCGCCGCAAGTGCACTTCTTGTCCTTAGCCATTGGGAAGCACTTCCTGAGGATCCTTTCTTTGTACCTAAAACGGAAGAGGAAATTGAAGAGTTTGGAGATGGTTCTAGTGTTCTTCCAAATACGGCAAGAAAGTTAATTAATGCAGTCAGACGGCGTAAGGGCCTTCCTGTGGAGGAAAAGGTAGTGCAGCATGGAACCAAGCAGAGGACACTGGCTCGTAAAGTCTGA 678 0.469 MDAEHLESSVISGFQLATSAGPLCDEPMWGLAFVIEARLSPFSGQHDESETHQQSEQYGIFAGQVIATVKDACRAAVLQNQPRLVEAMYFCELNTPTEYLGPMYAVLSRRRARVLKEEMQEGSPFFTVHAYLPVSESFGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKVVQHGTKQRTLARKV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00052 225 SMART EFG_C_a 83 172 IPR000640 -
Pumo8g00052 225 CDD eEF2_snRNP_like_C 86 165 - -
Pumo8g00052 225 SUPERFAMILY EF-G C-terminal domain-like 86 184 IPR035647 -
Pumo8g00052 225 SUPERFAMILY Ribosomal protein S5 domain 2-like 5 85 IPR020568 -
Pumo8g00052 225 FunFam Elongation factor like GTPase 1 82 217 - -
Pumo8g00052 225 Pfam Elongation factor G C-terminus 84 168 IPR000640 -
Pumo8g00052 225 Gene3D - 2 80 IPR014721 -
Pumo8g00052 225 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 5 224 - -
Pumo8g00052 225 CDD aeEF2_snRNP_like_IV 5 90 - -
Pumo8g00052 225 Gene3D - 82 217 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00052 2 225 Eukaryotic Initiation Factors Gene Family AT3G22980 78.571 3.65e-119 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00052 K14536 - gmx:100775257 447.203