Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00050 ATGAGCCGGTGGCTTCCGCTTTCAGAGGCGGTTTTGTCGATGGTGGTTAGGTGTTTGCCGGACCCGGTGACGGCCCAGGCGTTTAGGATATCGAGGTTGGTTCCGAAGAGGGAGGTTGTTGGGGATGTGGAGGAGGGGGTGGTGGAGGAGGCGGAGTTGGTGAGGAAGGCAGTGGAGGAGTGTGATTGTAGGGATGAGGCTCCTTGTGTTGCCTTTGTGTCGAAGATGTTTGCTGTGCCGGTTAAGATGCTGCCGGGACATAGGGTGGAGGTTGGCAATGGTTATGGTGATGAAGGAGAGGGTGAGTCGGATGAGTGTTTTTTGGCGTTTGCCAGGATTTTTAGTGGGGTTTTGTATGCAGGGCAGAGAATATTTGTGCTTTCTGCCTTGTATGATCCGGTGAAAGGGGAGTCGATGCAGAAGCATATACAGGAGGCTGAGTTGAAATCCTTGTATTTGATGATGGGGCAAGGGTTGAAAGTAGTGACATCTGCCAAGGCAGGGAATATTGTTGCCATTGCAGGCCTTGGGCAGCATATATTGAAGAGTGCTACTCTTTCTTCTACTAGGAACTGTTGGCCTTTTTCCAGTATGGCGTTCCAAGTTGCCCCGACTTTGAGAGTTGCGATTGAGCCATCCGATCCTGCTGATGTGGGTGCATTGCTCAAAGGCTTGAGGCTTTTGAATAGAGCTGATCCGTTTGTTGAGGTCACAGTGTCTGCAAGGGGAGAGCATGTTCTTGCTGCTGCTGGGGAAGTTCATCTTGAGAGATGCATAAAGGATTTAAAGGAGAGGTTTGCCAAGGTAAGCTTGGAGGTCTCTCCACCTCTCGTGTCCTACAAAGAAACCATTGAGGGAGACGTATTGAACGTGATGGAAAATTTGAAAGTTCTTAGGCAGGAGATCATCAGATTATGTTGA 921 0.4973 MSRWLPLSEAVLSMVVRCLPDPVTAQAFRISRLVPKREVVGDVEEGVVEEAELVRKAVEECDCRDEAPCVAFVSKMFAVPVKMLPGHRVEVGNGYGDEGEGESDECFLAFARIFSGVLYAGQRIFVLSALYDPVKGESMQKHIQEAELKSLYLMMGQGLKVVTSAKAGNIVAIAGLGQHILKSATLSSTRNCWPFSSMAFQVAPTLRVAIEPSDPADVGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGDVLNVMENLKVLRQEIIRLC 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00050 306 CDD EF2_II 68 189 - -
Pumo8g00050 306 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 285 - -
Pumo8g00050 306 FunFam Elongation factor Tu family protein 22 201 - -
Pumo8g00050 306 SUPERFAMILY Translation proteins 59 198 IPR009000 -
Pumo8g00050 306 CDD EF2_snRNP_III 204 275 - -
Pumo8g00050 306 FunFam Translation elongation factor 2 203 279 - -
Pumo8g00050 306 Gene3D Translation factors 22 201 - -
Pumo8g00050 306 Pfam Elongation Factor G, domain III 204 271 IPR041095 -
Pumo8g00050 306 Pfam Elongation factor Tu domain 2 108 186 IPR004161 GO:0005525
Pumo8g00050 306 SUPERFAMILY EF-G C-terminal domain-like 202 276 IPR035647 -
Pumo8g00050 306 Gene3D Elongation Factor G (Translational Gtpase), domain 3 203 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00050 Pumo-Chr8 1705166 1706086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00050 1 287 Eukaryotic Initiation Factors Gene Family AT3G22980 73.973 8.72e-152 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00050 K14536 - gmx:100775257 534.258