Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00045 ATGACGTTGTTGAAGTTCCATGAAGTGTGGAAGCCAGTTTTGGTGATGATTATAGTTAATTTAGCTCTGGCTTTTGTGAATATATTTCTGAAGAAGGTTCTTAATGAAGGAGTGGACTACTTGACCATCCTAACATATCGACAGGCTATTTCAGCCATTTTCTTGGCACCTATTGCTTGCTTCTATGAAAGGAAAAGGAAGCTGGAGGGTCACATAATATGCCTGCTTTTCCTAAGTGCTCTTGTGGGGGTAACACTCACTCAATACCTCTATCTTATTGGACTAGAATATACATCTGCCACGTTCGCATGTGCATTCCTAAATATGGTGCCTGTATTCACCTTTATTTTGGCGCTGCCACTGGGGATAGAGAAGGTGAACATGAAAAAGCTGAGTGCTAAGGCCAAGGTGTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTAATGTTGATCCTTTATAAAGGAGTGCCCTTATTCAACCGACGACCAGAGCACATAGCAGACAAGGGCACAACAACACCATCAGCCTCCAAGTTAAAGAAATGGATCATAGGTTCACTGCTTCTAACTGCAGGATGCCTCTTGTGGTCTTCATGGTTTCTTATTCAAGCAAGGATTAGCAAAAAGTATCCATGTCAATACTCTAGCACTGCCATTTTGTCCTTTTTTGCTGCCATTCAATCAGCAATATTAACTTTGGTCATCGATAGAAATAATGCAAAATGGATTCTCAAAGGAAAGTTAGAGATACTGACTATTGTATATGCTGGGCTGGTAGGATCAGGCTTGTGCTATGTGGCAATGTCATGGTGTGTGAAACAAAGGGGTCCAGTTTTTACTTCAGCATTTACCCCTCTTCTACAGATGTTCGTGGCTGTGCTTGATTTCTCTATACTACATGAGGAAATTTATCTTGGAAGTGTTGCAGGATCAGTCTTGGTTATTTCTGGCACTTATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAATGTGCCGTGAAGGGTTCTCAAGAAAGTCAAGAAGATGAAGAATGTAAGAATAATTTGGAGGCCAGTCTAAATGTACCTCCTAAGCTAAGGCCTAATGGGGAACAAGGATTCTCTGAATTACAAGTGAAGCAGTTAGCTATTACAGTAACTAGAAGTTGA 1152 0.4071 MTLLKFHEVWKPVLVMIIVNLALAFVNIFLKKVLNEGVDYLTILTYRQAISAIFLAPIACFYERKRKLEGHIICLLFLSALVGVTLTQYLYLIGLEYTSATFACAFLNMVPVFTFILALPLGIEKVNMKKLSAKAKVLGTFVCIGGALMLILYKGVPLFNRRPEHIADKGTTTPSASKLKKWIIGSLLLTAGCLLWSSWFLIQARISKKYPCQYSSTAILSFFAAIQSAILTLVIDRNNAKWILKGKLEILTIVYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILHEEIYLGSVAGSVLVISGTYILLWGKSKEEEQCAVKGSQESQEDEECKNNLEASLNVPPKLRPNGEQGFSELQVKQLAITVTRS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00045 383 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Pumo8g00045 383 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
Pumo8g00045 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Pumo8g00045 383 PANTHER WAT1-RELATED PROTEIN 11 337 IPR030184 GO:0016020|GO:0022857
Pumo8g00045 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00045 Pumo-Chr8 1627810 1630793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00045 1 330 Nodulin-like Gene Family AT1G11460 41.742 6.42e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00045 - - gmx:100794199 721.079