Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00042 ATGGGACTCTTAGTGGCCTCTCACAGCAACGATCTTGTCCTCGGTGACGAACACGAGGGAATACATGAAGGCATTGACGAATCTAAGAAGAAAAGGTCTGTGTTTCGAGGTGGTGATGAGGTGGAGGAGTTGTCTTCGAGTTTGGCTCATAGGGAGAGCTTGCTTCTAATTCTTAGTATTTCATCATTGGCCTCAGCATCTCTGAAAGTGGGTTTCTACAGCTCCACATGTCCATCTGCAGAGGAAATAGTCAGAAACACAGTAAACAAAGCAATTTCAGACAACGCGGGCATAGCTGCTGGTCTCATTAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCAGTGCTACTAGCATCTACCCCGGGTAACCCAATAGCTGAGAGAGACAATTTTGTTAACAATCCTAGCTTACGTGGCTTCGAGGTGATTGAGGATGCCAAGACCCAAATAGAGGCTGCATGTCCTCAAATGGTATCGTGTGCAGACATTTTAGCATTCGCAGCACGAGACAGTGCTCATAAAGTCGGTGGCATAAACTACGATGTTCCATCAGGACGCAGAGACGGTTGCGTCTCGATCGGTGATGAAGTGCCACAGAATCTGCCTGCACCAACCTTGAGTGCTGATGAACTTATCAGTAATTTTACACGAAAGGGGTTGTCTGCAGATGAAATGGTGACACTATCAGGAGCACATTCAATTGGTGTGTCACATTGCTCTGCCTTCTCAAAGCGCTTGTACTCTTTCAATGACACACTCACACAAGATCCCTCTATGGACTCTTCATATGCTGAGACGTTGAAAACCAAGTGCCCTGCACCACCTTCCACCACAGACCCAACAGTGTCTCTTGATCCTTCAACACCTATTCGTTTGGACAACAAATACTATGAGGGATTGATCAACCACCGTGGCTTGTTGACATCGGATCAAACGTTGTTTACCAGTCAAACCACAAGGGCAATGGTTCTGAACAACGCCAACAATGGTGCAGGCTGGGCTGAGAAGTTTGCCAAGGCAATGGTGCAAATGGGTTCCATAGAAGTGCTTACTGGCTCCGATGGTGAGATCAGGAAGCATTGCAGCTTTGTTAATTAA 1110 0.4658 MGLLVASHSNDLVLGDEHEGIHEGIDESKKKRSVFRGGDEVEELSSSLAHRESLLLILSISSLASASLKVGFYSSTCPSAEEIVRNTVNKAISDNAGIAAGLIRMHFHDCFVRGCDGSVLLASTPGNPIAERDNFVNNPSLRGFEVIEDAKTQIEAACPQMVSCADILAFAARDSAHKVGGINYDVPSGRRDGCVSIGDEVPQNLPAPTLSADELISNFTRKGLSADEMVTLSGAHSIGVSHCSAFSKRLYSFNDTLTQDPSMDSSYAETLKTKCPAPPSTTDPTVSLDPSTPIRLDNKYYEGLINHRGLLTSDQTLFTSQTTRAMVLNNANNGAGWAEKFAKAMVQMGSIEVLTGSDGEIRKHCSFVN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00042 369 CDD secretory_peroxidase 69 368 IPR033905 GO:0004601|GO:0042744
Pumo8g00042 369 FunFam Peroxidase 206 348 - -
Pumo8g00042 369 PANTHER PEROXIDASE 25-RELATED 60 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 101 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 287 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 77 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 227 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 303 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 343 356 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 180 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 142 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Plant peroxidase signature 161 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 SUPERFAMILY Heme-dependent peroxidases 68 369 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 ProSitePatterns Peroxidases proximal heme-ligand signature. 228 238 IPR019793 -
Pumo8g00042 369 Gene3D Peroxidase, domain 2 206 348 - -
Pumo8g00042 369 ProSiteProfiles Plant heme peroxidase family profile. 67 369 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 Pfam Peroxidase 84 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 ProSitePatterns Peroxidases active site signature. 99 110 IPR019794 GO:0004601
Pumo8g00042 369 FunFam Peroxidase 71 214 - -
Pumo8g00042 369 Gene3D - 71 369 - -
Pumo8g00042 369 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Haem peroxidase superfamily signature 162 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Haem peroxidase superfamily signature 180 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Haem peroxidase superfamily signature 99 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00042 369 PRINTS Haem peroxidase superfamily signature 289 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00042 Pumo-Chr8 1554585 1557141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00042 3 369 Peroxidase AT5G17820 40.701 5.32e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00042 K00430 - gmx:100786791 569.696