Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00041 ATGGATAATACTCCACGTTTGCTTCAAATGATTTCCAGCTTGGTTCTGATTCTAAGAGTTTCATCATTGGCCTCAGCATCTCTGAAAGTGGGTTTCTACAGCTCCACATGTCCTTCAGCCGAGGAAATAGTGAGAAGCACAGTAAACAAAGCAATTTCTGACAACGCAGGCATAGCTGCTGGTCTCATTAGAATGCATTTTCACGATTGCTTTGTCAGGGGTTGTGATGGTTCTGTGTTACTAGCATCTACCCCGGGTAACCCTATAGCTGAGAGAGACAATATTGTAAACAATCCAAGCTTACGTGGCTTTGAGGTCATTGAGGATGCCAAGACCCAATTAGAAGCTGCATGTCCTCAAACAGTATCATGTGCAGACATATTGGCATTTGCAGCACGAGACAGTGCTCTCAAAGTTGGTGGCATAAACTACGACGTGCCATCTGGACGCAGAGACGGTCGCATCTCGATCGGTGATGAAGTGCCACAGAATCTGCCTGCACCAACCTTGAGTGCTGATGAACTTATCAGTAAATTTACACGAAAGGGGTTGTCTGCAGATGAAATAGTGACACTTTCAGGAGCGCATTCAATTGGTGTGTCGCATTGCTCTGCCTTCTCAAAGCGCTTATACTCTTTCAATGACGCACTCACACAAGATCCCTCTATGGACTCTTCATATGCTGAGACGTTGAAAACCAAGTGTCCTGCACCACCTTCCACCACAGACCCAACAGTGTCTCTTGATCCTTCAACACCTATTCGTTTGGACAACAAATACTATGAGGGATTGATCAACCACCGTGGCTTGTTGACATCGGATCAAACGTTGTTTACCAGTCAATCCACAAGGGAAATGGTTCAAAGCAACGCTAACAATGGTGCAGGCTGGGCTGAGAAGTTTGCCAAGGCAATGGTGCAAATGGGTTCTATAGAAGTACTTACTGGTTCCGATGCTGCTGGTCTCATTAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCGATTCTACTAGCATCTACACCAGGTAACCCAATAGCTGAGAGAGACAATTTCGTTAACAACCCAAGCTTACGTGGCTTCGAGGTGATTGAGGATGCCAAGATCCAATTAGAGGCTGCATGTCCTCAAACAGTGTCATGTGCAGACATATTGGCATTCGCAGCACGAGACAGTGCTCTCAAAGTTGGTGGCATAAACTACGACGTTCCATCTGGACGGAGAGATGGTCGCGTCTCAATCGGTGATGAAGTGCCACAGAATCTGCCTGCACCAACCTCGAGCGCTGATGAACTTGTTAGTAATTTTTCACGAAAGGGGTTGTCAGCAGATGAAATGGTGACACTTTCAGGAGCGCATTCAATTGGTGTGTCGCATTGTTCTGCCTTCTCAAAGCGCTTGTACTCTTTCAATGACACACTCACACAAGATCCCTCTATGGACTCTTCATATGCTGAGACGTTGAAAACCAAGTGCCCTGCACCACCCGCAACTACAGACCCAACAGTGTCTCTTGATCCTTCAACACCTATTCGTTTGGACAGCAAATACTACGAGGGTTTGATCAACCACCGTGGCTTGTTGACATCAGATCAGACGTTGCAGACCAGTCAAACCACAAGGGAAATGGTTCAAAGCAATGCTAACAATGCTGCAGGCTGGGCTGAGAAGTTTGCCAAGGCAATGGTGCACATGGGTTCCATAGAAGTGCTTTCCGGCTCCGATGGTGAGATCAGAACGCATTGCAGCTTTGTTAATTGA 1770 0.465 MDNTPRLLQMISSLVLILRVSSLASASLKVGFYSSTCPSAEEIVRSTVNKAISDNAGIAAGLIRMHFHDCFVRGCDGSVLLASTPGNPIAERDNIVNNPSLRGFEVIEDAKTQLEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGRISIGDEVPQNLPAPTLSADELISKFTRKGLSADEIVTLSGAHSIGVSHCSAFSKRLYSFNDALTQDPSMDSSYAETLKTKCPAPPSTTDPTVSLDPSTPIRLDNKYYEGLINHRGLLTSDQTLFTSQSTREMVQSNANNGAGWAEKFAKAMVQMGSIEVLTGSDAAGLIRMHFHDCFVRGCDGSILLASTPGNPIAERDNFVNNPSLRGFEVIEDAKIQLEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIGDEVPQNLPAPTSSADELVSNFSRKGLSADEMVTLSGAHSIGVSHCSAFSKRLYSFNDTLTQDPSMDSSYAETLKTKCPAPPATTDPTVSLDPSTPIRLDSKYYEGLINHRGLLTSDQTLQTSQTTREMVQSNANNAAGWAEKFAKAMVHMGSIEVLSGSDGEIRTHCSFVN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00041 589 Gene3D - 31 318 - -
Pumo8g00041 589 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 FunFam Peroxidase 31 174 - -
Pumo8g00041 589 PANTHER PEROXIDASE 25-RELATED 18 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 FunFam Peroxidase 166 308 - -
Pumo8g00041 589 FunFam Peroxidase 426 568 - -
Pumo8g00041 589 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 ProSitePatterns Peroxidases proximal heme-ligand signature. 448 458 IPR019793 -
Pumo8g00041 589 Pfam Peroxidase 308 553 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 Pfam Peroxidase 44 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 CDD secretory_peroxidase 319 588 IPR033905 GO:0004601|GO:0042744
Pumo8g00041 589 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Pumo8g00041 589 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 ProSiteProfiles Plant heme peroxidase family profile. 325 589 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 Gene3D - 319 589 - -
Pumo8g00041 589 CDD secretory_peroxidase 28 332 IPR033905 GO:0004601|GO:0042744
Pumo8g00041 589 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Pumo8g00041 589 ProSitePatterns Peroxidases active site signature. 319 330 IPR019794 GO:0004601
Pumo8g00041 589 SUPERFAMILY Heme-dependent peroxidases 28 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo8g00041 589 Gene3D Peroxidase, domain 2 166 308 - -
Pumo8g00041 589 Gene3D Peroxidase, domain 2 426 568 - -
Pumo8g00041 589 SUPERFAMILY Heme-dependent peroxidases 317 589 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00041 Pumo-Chr8 1530980 1541094 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00041 317 589 Peroxidase AT1G05260 48.364 2.04e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00041 K00430 - gmx:100786791 564.303