Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00036 ATGTCTGCGACATCCAAGGTTCTGCCTGCTCTCCACTCTATCAAATCGTTGCCTCCTGAGTTCAAGATTACTGCTGGTCTAATGGAAAACCATGGAGATGCTAAGTTGAGAAGCAGTGATGTGATTGGATCAGGTAGTCCAGAAAACGGTGCTTTGATAGGGGAGGTTTCTGAGGAAGCTCAGAACCGTGTTGGTGACGTGGGTGTTTACGATGAGGACTTAGCGTACAGCAGAAAAAGTGTATCGTTAGAAGACAGGTCATCAATTGCTGATGAAGACTTAGAATCTGTTCCTCTGCCCTTCCCATCAATTTCAATGTCCTCTAGGGAACGCAGGTGGAGTGATACAACACCTTATGCTACAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTCCAAATGGGAATTGGGAGCTGGGGAAGATAATATCAACTTCTGGAAATGAATCCATCATTTCACTGCCTGACGGGAAGGTTTTGAAAGTGAAGGAAGAAAGTTTAGTACCAGCAAATCCTGATATCCTTGATGGGGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCGTCAGTTTTATACAACCTGCAATATAGATACAATCAAAACATGATTTATACAAAAGCAGGGCCTGTTTTGGTTGCTATAAATCCCTTTAAGAAAGTTCCTCTATATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGCAATAACAGACACGGCCATCCGAGAAATGATACGAGATGAAGTTAATCAATCTATAATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATTTTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATCTCCGGTGCTAATATTCAAACATGTAAGTTTTATTGTTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGATCATATCATATATTTTATCAGCTATGTGCCGGTGCACCTCCATCTCTCAGGGGGAAGCTAAACCTACAAAATGCAGAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCGCACAGTCATGGAAGCTCTTGATGTTGTCCACATTAGTAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGATTGATAATGAAAATCATGTTCAAGCCGTAGAAGATGAAGGTCTGTTCCATGTAGCCAAATTAATTGGCTGTGACATTGAAGATCTCAAGTTGACTCTATCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGACGCTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAGATAAATAAATCACTTGCGGTTGGCAAAAGACGCACCGGCAGATCAATCAGTATTCTAGATATATACGGCTTTGAATCTTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGTATGGATCCCGCAGAGTCTGAATGCTTAA 1758 0.3953 MSATSKVLPALHSIKSLPPEFKITAGLMENHGDAKLRSSDVIGSGSPENGALIGEVSEEAQNRVGDVGVYDEDLAYSRKSVSLEDRSSIADEDLESVPLPFPSISMSSRERRWSDTTPYATKKKLQSWFQLPNGNWELGKIISTSGNESIISLPDGKVLKVKEESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKFYCSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAEDYKYLRQSNCYSITGVNDAEEFRTVMEALDVVHISKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFHVAKLIGCDIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEVWIPQSLNA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00036 585 Pfam Myosin head (motor domain) 177 578 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 PRINTS Myosin heavy chain signature 259 284 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 PRINTS Myosin heavy chain signature 301 328 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 PRINTS Myosin heavy chain signature 533 561 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 PRINTS Myosin heavy chain signature 205 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 FunFam Myosin heavy chain 357 413 - -
Pumo8g00036 585 SMART MYSc_2a 169 585 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 Gene3D Kinesin motor domain 178 542 IPR036961 -
Pumo8g00036 585 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 122 171 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 Gene3D - 357 416 - -
Pumo8g00036 585 ProSiteProfiles Myosin motor domain profile. 175 585 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00036 585 PANTHER MYOSIN 168 581 - -
Pumo8g00036 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 582 IPR027417 -
Pumo8g00036 585 Gene3D Myosin VI head, motor domain, U50 subdomain 418 527 - -
Pumo8g00036 585 Gene3D - 543 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00036 Pumo-Chr8 1375969 1385270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00036 6 584 Myosins gene family AT1G50360 73.402 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00036 - K10357 gmx:100781736 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00036 8 1375969 1385270 Pumo8g00036 8 1375969 1385270 ECH