Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00035 ATGGCATTGACTGGGCCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAGAAGAGGCCACTGGGGTTATTATCCTTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTAACATTTGCTAACAAGCTTAAACAGCATTTGAATTCTAATTCGTGTTTCAAGGGAGAAAGAGACCAAGCCTTTACTGTACACCATTATGCTGGGCAGGTAACCTATGATACAACTGGATTTCTGGAGAAAAACAGAGACCTATTGCACTTGGATTCCATCCAACTTCTATCCTCATGCACATGTCCTCTTCCTCAAATATTTGCATCTCATATGCTCACTCAGTCTGATAAGCCGGTAGTTGGTCCCTTACACAAGTTAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCTACTGATGCAACGACTAGAGAGCACTACTCCACATTTTATTCGCTGCATTAAACCCAATAATCTCCAATCACCTGAATCATATGAGCAAGGGCTTGTATTGCAACAGCTGAGATGCTGTGGGGTCCTGGAAGTAGTTCGAATATCGAGGTCAGGCTTTCCAACAAGAATGACTCACCAAAAATTTGCCAGAAGATACGGTTTTCTCCTCCTTGATAATGTTGCATCTCAGGATCCACTTAGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGGACAGATCCCCCAGAATCTTTGATTATCTCCATGGGTTACCAAGCACGTCGTTCTCTCAAGGAGTTTCAGGGAGGAATCACTACTTTGCAGTCATTTATTAGGGGAGACAAAACCAGAAAGGCATATTCAGCTTTACTTAAGAGGCATAGAGCTGCTGTTATTATACAGAAGCGCATCAAAGCAGTATTTGCAAGAAACAGAATGAGGACTATTAGTGATGCTGCAATAGTCATACAAGCAGTTATTCGTGGTTGGTTGGTCAGAAGATGCTCAGGAAATATTGGATTTTTGAAATCTGGAGACATGAAGATGAAAGAGTCAGATGAGGTTGTGGTTAAGTCATCTTTCCTGGCCGAATTACAGCGCCGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCATCAACGTCTCCAACAATATGAGAGCAGATGGTCTGAGTATGAATTAAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATTGATGACTCTGAAAGAAATTCAGATGCATCTGTTAATGCAAGTGATGAGCGGGATAACAGCTGGGACGTGGGAGGTAATCACAAGCGCCAAGAAAGCAATGGAGCAAGATCAACGAGTGCTGGTTTAAGTGTTATAAGTCGGCTAGCTGAAGAATTTGAGCATAGGAGTCAAGTGTTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAGGTAGAAGCTAGTTTGAACCCAGATCAAGAGCTTAGAAGGTTAAAGCAAATGTTTGAAGCTTGGAAAAAGGATTATGGGGCAAGACTGCGCGAAACAAAAGTCATTTTAAATAAACTTGGAAGCGAAGATGGCGCACTTGAGAAAATGAAGAAAAAGTGGTGGGGAAGAAGGAACAACAGTACAAGGATAAATTGA 1743 0.4154 MALTGPKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDQAFTVHHYAGQVTYDTTGFLEKNRDLLHLDSIQLLSSCTCPLPQIFASHMLTQSDKPVVGPLHKLGGADSQKLSVATKFKGQLFLLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMTHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGTDPPESLIISMGYQARRSLKEFQGGITTLQSFIRGDKTRKAYSALLKRHRAAVIIQKRIKAVFARNRMRTISDAAIVIQAVIRGWLVRRCSGNIGFLKSGDMKMKESDEVVVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDNSWDVGGNHKRQESNGARSTSAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILNKLGSEDGALEKMKKKWWGRRNNSTRIN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00035 580 Gene3D Kinesin motor domain 158 200 IPR036961 -
Pumo8g00035 580 Pfam Myosin head (motor domain) 7 255 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00035 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 336 IPR027417 -
Pumo8g00035 580 MobiDBLite consensus disorder prediction 447 483 - -
Pumo8g00035 580 Gene3D - 305 350 - -
Pumo8g00035 580 Gene3D - 7 157 - -
Pumo8g00035 580 Gene3D - 201 304 - -
Pumo8g00035 580 Pfam IQ calmodulin-binding motif 330 346 IPR000048 GO:0005515
Pumo8g00035 580 Coils Coil 374 422 - -
Pumo8g00035 580 ProSiteProfiles IQ motif profile. 328 357 IPR000048 GO:0005515
Pumo8g00035 580 SMART MYSc_2a 1 259 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00035 580 SMART iq_5 304 326 IPR000048 GO:0005515
Pumo8g00035 580 SMART iq_5 327 349 IPR000048 GO:0005515
Pumo8g00035 580 SMART iq_5 278 300 IPR000048 GO:0005515
Pumo8g00035 580 MobiDBLite consensus disorder prediction 469 483 - -
Pumo8g00035 580 ProSiteProfiles IQ motif profile. 280 308 IPR000048 GO:0005515
Pumo8g00035 580 ProSiteProfiles Myosin motor domain profile. 1 274 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo8g00035 580 PANTHER MYOSIN 7 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00035 Pumo-Chr8 1369619 1375867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00035 7 572 Myosins gene family AT1G50360 72.461 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00035 - - gmx:100796845 1055.43