Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00021 ATGTTTCCTCAGGAGAATCATAGTAACGGCTATCAGCAGGGACCGGGGATGGGGATGGGGATAGGGATGGGTTACAGAGAGCGAGTCCGTCGCGGCACTCGCAGGTCACGTGCCTCCACTTCCTCACACTCCGTTAGGGTTTACGACCAACAACAACCGCAACATCATCGACCTCCTTGCACTGATTTCGACGTCGCCTATTTTCATTCCTACGCTCACCTTGGCATCCACCAAGAGATGATCAAGGATCGTGTGCGTACTGAAACTTATAGGGATGCAATCATGCAGCATCAGAGTTTCATTGCAGGCAAAGTTGTGGTTGATGTTGGATGCGGCACAGGAATCCTCTCTATATTTTGTGCTCAGGCTGGTGCAAAACGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTGAAAGCAAATAACTTGTCTGATGTTGTTGTTGTATTGCATGGGCGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTAATGCTAGAGATCGTTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACGGACAGATACAGTGACAGTGTTGACTTCTGGCGCAATGTATATGGAATTGATATGTCTGCCATGGTATCACTAGCTAAACAATGTGCATTTGAAGAACCTTCCGTGGAGACAATAACTGGTGAAAATGTTTTGACATGGCCACATATAAAATATATTGATAGTTATTCTGTTACCATCCAAGAGTTAGAATCTGTAACAGCCAAGTTTAAGTTCAACTCTATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGACGTTGAATTTAATGGGCATGCAATAGCATCAAACAATTATCATTCGACAACTTCATTTATTGACAATCATCAGATGAATGGTAGTCAGAGAAAAAGGCGAACAAATCCAAATGAAGCACTGATCTTGTCCACTGCGCCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTTTATGATCCTATAGAGCTGGAACAAGATCAACTAATTGAAGGTTCAGTGACATTGTCACAAAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1245 0.4281 MFPQENHSNGYQQGPGMGMGIGMGYRERVRRGTRRSRASTSSHSVRVYDQQQPQHHRPPCTDFDVAYFHSYAHLGIHQEMIKDRVRTETYRDAIMQHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVINARDRWLKPGGLILPSSATLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMVSLAKQCAFEEPSVETITGENVLTWPHIKYIDSYSVTIQELESVTAKFKFNSMMRAPLHGFAFWFDVEFNGHAIASNNYHSTTSFIDNHQMNGSQRKRRTNPNEALILSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLSQSKENARFMNIHLEYTSGGRSYVKESVMR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00021 414 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 42 402 IPR025799 GO:0016274|GO:0018216
Pumo8g00021 414 Gene3D - 208 413 - -
Pumo8g00021 414 Pfam Ribosomal protein L11 methyltransferase (PrmA) 102 177 - -
Pumo8g00021 414 CDD AdoMet_MTases 106 205 - -
Pumo8g00021 414 FunFam Protein arginine N-methyltransferase 6 208 412 - -
Pumo8g00021 414 MobiDBLite consensus disorder prediction 38 57 - -
Pumo8g00021 414 Gene3D Vaccinia Virus protein VP39 61 206 IPR029063 -
Pumo8g00021 414 FunFam Protein arginine N-methyltransferase 6 60 206 - -
Pumo8g00021 414 MobiDBLite consensus disorder prediction 1 57 - -
Pumo8g00021 414 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 404 IPR029063 -
Pumo8g00021 414 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 64 414 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00021 Pumo-Chr8 1095313 1109611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00021 67 381 C2H2 Transcription Factor Family AT3G12270 38.671 1.20e-64 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00021 K11437 - gmx:100809174 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00021 8 1095313 1109611 Pumo8g00021 8 1095313 1109611 ECH