Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00014 ATGCACCTAGCGGCCAAGAGAAACAAGTTAATTACGGTGGGTGTTGACATGATTGGGGAAGTACGACCAGGAGATATCTTTGAGGAGGGATACCCTATTTCATGTGTGTCTTTTTACGATGTTAATGAGTCGCCACATGACAAGTCATGCTCAAGAAGATTTTGTTGTGAGACTCCAATAGCTTGTAGGCTATCCAGTTTCATCTATTTTTCTTCTCTACTTAACTTCAACAATAACTACACCAAGCTGCTTGAATCCTACCCATGCAGTTATGCACTTGTGGTTAAAGATAGAGCCTACCAGTTCTCCCCCAAAGACCTCCACAACCTCAACAACAACTATACGTTTCCTGTGGTTGTGGATTGGGTTGTGGGAACTCACACGTGCGAACATGCTCAGAAGAATGCTACAACTTATGAGTGTAAGTCAACCAATACTAAATGTCACAATGCTGAGCCGAGACCTGGTTACCACTGTAAATGCTCTAGTGGCTTTCGGGGAAACCCTTACTTCCTTGATGGCTACAAAGGTGTGATTATAAGTATCTTAATACTTTTCGTGGAAAGCATTTCTATGTATTGGATCCTGAATAAAAGAAAGCACATCAAAAGTAAGGACCAACTTTTTCAACAAAATGGTGGCTTTCTCTTTCAAGAACAAATAGCAAGGCATGGAGGATCAACTGATATAGCTAAAGTCTTCACTTTAGAAAAGTTAAAGGAAGCCACCAACAACTTTGACAGAAGCAGGATCATTGGCAAAGGTGGTCAAGGAGAAGTCTACAAAGGAATATTAGAAGATAATAAAATTGTGGCAATTAAAAAGTCCTTAATCAGCCAGACAAGCCAGATTGACCAATTCATTAATGAGATAATATTGCTTTCTCAAATAAACCATAGGAATGTGATAAAGCTATTGGGATGTTGTTTAGAGACAGAAGTTCCTTTACTTGTTTATGAATTCATTCCTAATGGCACCGTTTTTGAGCGTCTTCGACGTCAAGATCAATTTTTAAGAATTTCATGGGAAACAAGATTGCAAATAGCTGTAGAAACTGCTAGGGCCCTGGCATACTTGCATTATGGTACCTCTACACCAATCATACACAGAGATGTGAAAACTTTGAACATACTACTTGATCATAATCTCTATGCAAAGGTTTCTAATTTTGTACTTTCAAGGATCATTCCTCTAGATAAAAATCAGATAACCACTGCGGTGAGGGGGACACCAGGGTATATTGACCCAGAATACAAGTGCACAAGTGAATTAACGACAAAGCGTGATGTTTATAGCTTTGGAGTTGTCCTAGTAGAACTACTGACAAGGGAGAAGGTACACTATTTCAATAGGCTAGATAAATCAAAGCTTGCAGTGTTGTTTGAGTCTTCCATGAATGATAATAAATTACTTGACATTGTAGATAGCCACTTAACATATGAGGCAAATGTTGAGCAATTCATGGATGTTGCCAATATTGCAAGACATTGTTTAACATTGAATAGGGAGGAAAGGCCCACCATGAAACAAGTGACAAAAAAACTTGAATGA 1551 0.3868 MHLAAKRNKLITVGVDMIGEVRPGDIFEEGYPISCVSFYDVNESPHDKSCSRRFCCETPIACRLSSFIYFSSLLNFNNNYTKLLESYPCSYALVVKDRAYQFSPKDLHNLNNNYTFPVVVDWVVGTHTCEHAQKNATTYECKSTNTKCHNAEPRPGYHCKCSSGFRGNPYFLDGYKGVIISILILFVESISMYWILNKRKHIKSKDQLFQQNGGFLFQEQIARHGGSTDIAKVFTLEKLKEATNNFDRSRIIGKGGQGEVYKGILEDNKIVAIKKSLISQTSQIDQFINEIILLSQINHRNVIKLLGCCLETEVPLLVYEFIPNGTVFERLRRQDQFLRISWETRLQIAVETARALAYLHYGTSTPIIHRDVKTLNILLDHNLYAKVSNFVLSRIIPLDKNQITTAVRGTPGYIDPEYKCTSELTTKRDVYSFGVVLVELLTREKVHYFNRLDKSKLAVLFESSMNDNKLLDIVDSHLTYEANVEQFMDVANIARHCLTLNREERPTMKQVTKKLE 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00014 516 FunFam Wall-associated receptor kinase 2 216 321 - -
Pumo8g00014 516 Pfam Protein kinase domain 247 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00014 516 SUPERFAMILY Protein kinase-like (PK-like) 229 514 IPR011009 -
Pumo8g00014 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Pumo8g00014 516 SMART serkin_6 246 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00014 516 Gene3D Phosphorylase Kinase; domain 1 216 321 - -
Pumo8g00014 516 ProSiteProfiles Protein kinase domain profile. 246 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00014 516 FunFam Wall-associated receptor kinase 2 322 516 - -
Pumo8g00014 516 Gene3D Transferase(Phosphotransferase) domain 1 322 516 - -
Pumo8g00014 516 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 6 516 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00014 Pumo-Chr8 288570 290799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00014 5 516 Receptor kinase-like Gene Family AT1G21250 41.739 8.86e-138 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pumo8g00014 Pkinase 3.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00014 - - gsj:114410917 554.288