Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo84g00009 ATGTTGATTTTGTCATCAGTATCACATCCCTCTCCCTACAGCTACCATGTGTTCCTCAGCTTCAGAGGCTCAGACACACGCCATGGTTTTACTGGAAATCTCTACAAAGCTCTTCGTGACAGCAGAATCCACACTTTCATTGATGATCAGGAGCTTCAGAGTGGGGAGAAGATAACACCAGCACTTGTGAACGCAATTGAAGAGTCCAGGATTGCCATCATTGTTCTCTCTAACAACTATGTTTCTTCCTCATTTTGTTTAGATGAACTTGCAACCATCCTTGACTGCGAGAGGAAAGGACTGTTGGTTATACCAGTATTTTATAATGTTGACCCTTGCGATGTTCGACACCAGAAAGGTAGTTATGGAGAAGCATTTGCTAAGCATGAGGAAAGGTTCCAGCATGACCAAGAGAAGTTACAGAGATGGAGGATGGCTCTGCGTGAAGTAGCTAACTTGTCTGGCTATCAATTCAAACATGGAGATGGATATGAATACCAGTTTATTGGGAGAATTGTTGAGTCGGTCTCCAAGAAGATTAATGGTGCTACACTGGGGTCACAAGTGCAAGACGTAAGGAAGCTTTTGGATATTGGATCTGAAGATGGTGTCCTCATGATAGGGATCCACGGAAAGGGTGGAGAAGGAAAAATATTACTTGCTCTAGCCGTTTATAGGTTAATTGCTGGTCATTTTGATGGTTCGTGTTTTCTTCGAAACGTGAGAGAAAAATCAAACAAACAAAAGTTATCACATCTCCAAAGCATCCTTCTTTCCAAAGTACTTGGAGGGAAGAAAATTAAAATAGAGAGTGAGCAAGAAGGAATTTCAATGATACAACAGAGGCTCCAGCAAAAAAAGGTTCTCTTGATTCTTGATGATGTTAACAAGTATGAGCAGTTAGCGGCACTTGTTGGAAGACCTGATTGGTTTGGTCCTGGCAGCAGAGTCATCATCACCACTCAAGACAAACAATTGCTGACAACTCATAAGGTTAAAAGAACATATAAGGTGAAGAAAATGACAATACATCAACAAATATTTTCTGTCATGACAACATATATCACTGGGGGCTAG 1077 0.4113 MLILSSVSHPSPYSYHVFLSFRGSDTRHGFTGNLYKALRDSRIHTFIDDQELQSGEKITPALVNAIEESRIAIIVLSNNYVSSSFCLDELATILDCERKGLLVIPVFYNVDPCDVRHQKGSYGEAFAKHEERFQHDQEKLQRWRMALREVANLSGYQFKHGDGYEYQFIGRIVESVSKKINGATLGSQVQDVRKLLDIGSEDGVLMIGIHGKGGEGKILLALAVYRLIAGHFDGSCFLRNVREKSNKQKLSHLQSILLSKVLGGKKIKIESEQEGISMIQQRLQQKKVLLILDDVNKYEQLAALVGRPDWFGPGSRVIITTQDKQLLTTHKVKRTYKVKKMTIHQQIFSVMTTYITGG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo84g00009 358 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 156 IPR035897 -
Pumo84g00009 358 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 182 - -
Pumo84g00009 358 Gene3D - 185 339 IPR027417 -
Pumo84g00009 358 PRINTS Disease resistance protein signature 282 296 - -
Pumo84g00009 358 PRINTS Disease resistance protein signature 206 221 - -
Pumo84g00009 358 SMART till_3 14 153 IPR000157 GO:0007165
Pumo84g00009 358 Pfam NB-ARC domain 189 338 IPR002182 GO:0043531
Pumo84g00009 358 Pfam TIR domain 15 184 IPR000157 GO:0007165
Pumo84g00009 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 345 IPR027417 -
Pumo84g00009 358 Gene3D - 10 184 IPR035897 -
Pumo84g00009 358 ProSiteProfiles TIR domain profile. 13 180 IPR000157 GO:0007165
Pumo84g00009 358 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 337 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo84g00009 63 348 WRKY Transcription Factor Family AT4G12020 30.375 7.87e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo84g00009 - - gmx:100812810 459.529