Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo83g00007 ATGGGTGCCGGTCTCGTTGCGTTCCTCTTAATGGTTCTTGTGCAATTGATCTATGCAGTGATGAATATTACTTCAAAGCTTGCAATAGAATCTGGCATGAGCCCTCTTGTCCTTGTTGCTTATCGACAACTCTTTGCGACTGTGTCCATTGCTCCCTTTGCTTTTTGGCTCGAATGGAAGACGCTTCCAAGGATGACAAAGCGTCTTATGGTTCAGATATTAATTTCGTCCTTGACAGGAGTTACAGGAAATCAGATGCTTTACTTTGTGGGGCTCAAATTTTCAACCGCTACAATTGCATGTGCACTGACCAATTTGCTCCCAGCTTTCACTTTTATCCTTGCAGTTCTCTTCAGACAAGAGGATTTGGGAATTAAGAAGAGGGCTGGCCTAGCAAAGATATTCGGGACAATATTGTGTGTGAGTGGGGCCTTGCTTTTGTCATTTTACCATGGAAAAACCATTGGTTTAGGCCAATCAAGTATTCACTGGAGATATGCAGAGAAAATGGAAGGAACTAGCTCTTCTGGCAAAGGAAACATGTTTGTAGGCCCTGTAGTCGTAATTCTTAGCACCCTTGTTTGGGCACTATGGTTCATAGTTCAAAAAGACATAAGCAAGAAGTTTCCAGCTCCTTACACGAGCACTGGCATAATGTGTTTCATGGCAAGCTTTCAATGCATGATCATTGCTGTGTGTGTCGACCACACGGCCTCAGCTTGGTCACTTCACAATGCTATGAGACTTTCCTCTGCTCTTTATGCGGGAATATTTTGCACTGGATTAGCGTATTGCCTCATGTCGTGGACCATTGAGAGAAAAGGTCCTCTTTATGTCTCTGTATTTACCCCTTTGCAACTTGTCCTCACTGCAATTCTAAGCTGGGCTTTGCTTCGGGAGAAATTATACGTTGGAACTGCCGTAGGGTCTCTCTTGATAATATTGGGACTCTATTCTGTTCTTTGGGGAAAGAGTGAAGAGGTGAATAAGGAAGACGGTATTGAAGAGGCAGTTAAAGAAGCAGTCAAGGATCAGAAGAATGACATGGAATTGCAATCATATGTGCCATCCAATGGTATTCTACCTTTCTTTGTGGAGTTATTGTCAAGGAAAGATACACCCCTTGCAACTGTCTTTGATGCCAATATTATTCCTCATCTTGTTCAATTTCTTCAACATGCTGAGTTTGACATCAAGAAGGCGGTTGCCCGGGCCATCTTCTATTTGACTTATGGAGGATCTAATGACCATATCAGGTATGGTTCACCATTACATTTTATTGAGCTCTCCAGAGGCAAAGGTTGTGTCAACTTGTCTGGAGGGGCTGGAGAACATTTTGAGGGTTGGAGAAGCTGA 1356 0.4314 MGAGLVAFLLMVLVQLIYAVMNITSKLAIESGMSPLVLVAYRQLFATVSIAPFAFWLEWKTLPRMTKRLMVQILISSLTGVTGNQMLYFVGLKFSTATIACALTNLLPAFTFILAVLFRQEDLGIKKRAGLAKIFGTILCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGTSSSGKGNMFVGPVVVILSTLVWALWFIVQKDISKKFPAPYTSTGIMCFMASFQCMIIAVCVDHTASAWSLHNAMRLSSALYAGIFCTGLAYCLMSWTIERKGPLYVSVFTPLQLVLTAILSWALLREKLYVGTAVGSLLIILGLYSVLWGKSEEVNKEDGIEEAVKEAVKDQKNDMELQSYVPSNGILPFFVELLSRKDTPLATVFDANIIPHLVQFLQHAEFDIKKAVARAIFYLTYGGSNDHIRYGSPLHFIELSRGKGCVNLSGGAGEHFEGWRS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo83g00007 451 PANTHER WAT1-RELATED PROTEIN 7 328 IPR030184 GO:0016020|GO:0022857
Pumo83g00007 451 SMART arm_5 371 411 IPR000225 GO:0005515
Pumo83g00007 451 Gene3D - 337 429 IPR011989 -
Pumo83g00007 451 Pfam Armadillo/beta-catenin-like repeat 377 410 IPR000225 GO:0005515
Pumo83g00007 451 SUPERFAMILY ARM repeat 346 420 IPR016024 -
Pumo83g00007 451 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Pumo83g00007 451 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Pumo83g00007 451 Pfam EamA-like transporter family 8 147 IPR000620 GO:0016020
Pumo83g00007 451 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo83g00007 5 359 Nodulin-like Gene Family AT1G09380 57.778 7.68e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo83g00007 - - gmx:100801512 672.93