Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo80g00001 ATGGATCTAGCTTTCTCACTCCAAGCACCTTCTCTCTTCGAATCTGTCTCTTTCTCTCTCTCTGCTCTAGTCGTAGGTGCGGCGGACGATGCAGAGGCTAGTGTAAAAGACGACAACAGCGGTGCAAGTGCTGGTAGCTTTGGGAGTGTTTACAAAGGCATGCTAAGAGATGGCCGTGAAGTGACAATTAAAAGAGGGGATACTAGTACTATGAAGAAGAAATTTCAGGAGAAAGAAATTGTTTTTGATTTTGAATTGGTCATGCTGTCTCGACTTCACCACAAGCATTTGGTGAGGCTAATTGGGTTCTGTGAGGAGTTAGTGTGA 327 0.4465 MDLAFSLQAPSLFESVSFSLSALVVGAADDAEASVKDDNSGASAGSFGSVYKGMLRDGREVTIKRGDTSTMKKKFQEKEIVFDFELVMLSRLHHKHLVRLIGFCEELV 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo80g00001 108 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 43 106 IPR044815 GO:0004674
Pumo80g00001 108 Pfam Protein tyrosine and serine/threonine kinase 44 105 IPR001245 GO:0004672|GO:0006468
Pumo80g00001 108 Gene3D Phosphorylase Kinase; domain 1 43 107 - -
Pumo80g00001 108 ProSiteProfiles Protein kinase domain profile. 36 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo80g00001 108 SUPERFAMILY Protein kinase-like (PK-like) 44 106 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo80g00001 44 106 Receptor kinase-like Gene Family AT3G55950 68.254 4.56e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo80g00001 PK_Tyr_Ser-Thr 3.9e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo80g00001 - - gmx:100776682 119.783