Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02297 ATGGAATCCGCATCTTCTTCATCGTCCTTCTCAAAATCAAAACACCAACGGGAACACGACGTGTTCATCAGTTTCAGGGGAGAAGACACTCGTGCGAGTTTCGTTTCTCATCTCCATTCCGCCCTCACAAATGCTAGAGTCAACACTTTTCTGGACGACGAGAATTTTCCCATTGGAGTGGAGCTGAAAGAGGGACTGTTTCGAACCATAGAAGGATCTCGGATGTGTGTTGTTGTTTTCTCCACAAACTACCCTAGATCTTCTTGGTGCCTTGAGGAGTTGGAAAAAATCATTGGATGCCACAAAACTTATGGCCACATAGTTGTGTCCATATTTTACGATGTTGACCCATCCCATGTACGTCATCAGAAGGATGCTTTCGGAGAAGCTTTGAAAGAATTTGCAGGAAAATGCGTTTCGAAACAAGATGCAGAATCTGAGCTGTCGAGGTGGAGCAGCGTACTCACTGAAGCTGTAAATTTCTCGGGTTGGGATGTGAGAAATCACAGGAATGAAGATAAACTAGTGAAGGAAACTGTTGAGGACGTTCTCACAAGACTAGACAACACACTTTTGTCTATTACTGAATTTCCTGTTGGATTAGAATCCCACGTGCAAAAAGTGATTGGATTTATTCAAAATCAGTCCACAGAAGTTTGTATCATAGGGATTTGGGGAATGGGAGGATTGGATTCAAGGATAGAAGTTTCATTGAAAATATTCGAGAAAGAAGTTTGTGAAACAGATCGTAGAGGGCATGTTCATTTACAAGAACAACTTCTTTCAAATGTCCTTAAAACAAAGGTGAACATATATAGCGATGGGATGGGAAGAGCTATGATGGAGAATAAACTTTCTGGAAGAAAGGCACTCATTGTACTTGACAATGTTAACGAGTTTGGTCAATTAAAAGACCTATGTGGAAATCGCAAATGGTTCGGTCAAGGAAGTGTAATAATCATTACAACTAGAGATGTACACATACTAAACATACTTAAAGTTGATAATGTTTATAAAATGGACGAAAATGAGTCCCTTGAGCTTTTTAGTGGGCATGCTTTTGGAGAAGCAAAACCAAGAGAAGACTTCAATGAACTTTCAAGAAATGTAGTTGCTTATTGTGGAGGACTACCACTTGCTCTTGAAGTCCTTGGCTCTTATTTAATTGAGAGGACAAAGAAAGAGTGGGAAAGTGTATTGTCGAAACTAGAAATAATTCCAGATGATCAAGTTCAAGAGAAATTAAGAATACGCTTTGACGGTTTATGCAATCACATGGAAAAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGTAAAGACAGAGCCTATGTTACAGAAATACTAAATGGCTGTGGACTGCATGCTGATATTGGAATAATAGTTCTCATAGAGCGTAGCCTCGTAAAAGTTGAGAAGAACAACAAACTTGGAATGCATCATCTGCTACGAGACATGGGAAGAGAGATTATTCGTGAAAGTTCAACTAAGGAACCTGGGAAGCGTAGTCGATTGTGGTTTCAAGAGGATGTAATTAATGTATTGACAAAGAATCCTGGGACAGAAGCAATTGAGGGATTGGCTCTGAAATTGCATTTCACTAGTAGAGATTGCTACAAAGCTTATGCTTTTGAGGAAATGAAGAGATTGAGACTGTTGCAACTTGATCATGTACAACTCACTGGGGATTATGGGTATCTATCTAAGCAACTGAGATGGATCTGTTGGCAAGGGTTTCCTTCAAAATACATGCCCAACAACTTTTATATGGAAGGTGTAATTGCGATTGATTTAAAACACAGCAATCTTAGACTTGTCTGGAAAGAACCCCTGGTTTTGGAGAGGCTAAAAATCCTCAATCTTAGTCACTCCAAGTACTTGACAGAAACCCCTGACTTTTCAAAATTACCAAATCTTGAAAAGCTAATTCTCAAAGATTGCCCAAGTTTGTGCAAGCTACACAAGTCCATTGGAGATCTCCGCAATCTTATTCTGATAAATTTGAAAGACTGTATAAGTCTTGGCAATCTGCCAAGGAGAGCTTATAAGTTGAAATCTATGAAAACTCTCATCCTTTCAGGTTGTTCCAAGATTGACAATTTGGAAGATATAGTGCAGATGAAATCCTTGACAACTTTAATTGCTGAAAATACTGCTGTGAAACAAGTGCCGTTTTCAATAGTAAGCTCAAAAAGCATTGGATATATCTCCTTATGTGGATATGAAGGATTAGCACGGAATGTTTTTCCTTCTATCATTCAGTCTTGGATGTCACCAACAATGAATCCCCTATCTTATATTCATCCGTTTTGTGGCACATCATCATCTCTAGTTTGCATGGATATGGAGAATACTAATTGGGGTGATCTTTCGCCATTACTTAGCAACCTTTCAAATCTTCGAAGTGTTTTGCTGCAATGTGACACAGAGTTTCAACTATCTAAACAACTACACACAATTCTGGATGATGTATATGGTGTCAATTTTACAAAATTAGAAATAACATCACATGCATCACAAATTTCAAACCATTCCTTGAGGTCTTATTTGATTGGAATTGGAACTTACCAAGAAGTCTTCAATACTCTCAGCAATAGCATATCTGAGGGATTGGCAACCAATGAGTCTTGTGATGTTTTTCTCCCAGGTGACAATCATCCTTATTGGTTGTCCCACATGGGTGAGGGACATTCAGTGTATTTCACTATGCCCGAGGCTTGTCATCGCATAAAGGGAATCACTTTATGTGTTGTTTATTTATCAGCCCCTGAAAACATACCAACCGAATATCTTATTAGTGTGGTAATGGTTAATTACACAAAGTGCACCATCCAGATATACAAGCGAGAGACAGTAATTTCCTTTAATGATCAAGATTGGCAGGGCATGATTTCACATTTGGGATCTGGAGACAAGATGGAGATTTTCGTGACTTTCGGGCATGGATTGCTGGTCAAGAGGACAGTTGTATATCTAATGCTTGATGAATCAATTGACTTGATGAAATTAGAGCCATCCGCGAAGGCGAAGAAAAATATTTTTGCAAGACTTACAAAGAGAATGGGAGAATGTTCATGCATGAGCCGAAATAGAGGCTTCAACTAA 3108 0.3874 MESASSSSSFSKSKHQREHDVFISFRGEDTRASFVSHLHSALTNARVNTFLDDENFPIGVELKEGLFRTIEGSRMCVVVFSTNYPRSSWCLEELEKIIGCHKTYGHIVVSIFYDVDPSHVRHQKDAFGEALKEFAGKCVSKQDAESELSRWSSVLTEAVNFSGWDVRNHRNEDKLVKETVEDVLTRLDNTLLSITEFPVGLESHVQKVIGFIQNQSTEVCIIGIWGMGGLDSRIEVSLKIFEKEVCETDRRGHVHLQEQLLSNVLKTKVNIYSDGMGRAMMENKLSGRKALIVLDNVNEFGQLKDLCGNRKWFGQGSVIIITTRDVHILNILKVDNVYKMDENESLELFSGHAFGEAKPREDFNELSRNVVAYCGGLPLALEVLGSYLIERTKKEWESVLSKLEIIPDDQVQEKLRIRFDGLCNHMEKDIFLDVCCFFIGKDRAYVTEILNGCGLHADIGIIVLIERSLVKVEKNNKLGMHHLLRDMGREIIRESSTKEPGKRSRLWFQEDVINVLTKNPGTEAIEGLALKLHFTSRDCYKAYAFEEMKRLRLLQLDHVQLTGDYGYLSKQLRWICWQGFPSKYMPNNFYMEGVIAIDLKHSNLRLVWKEPLVLERLKILNLSHSKYLTETPDFSKLPNLEKLILKDCPSLCKLHKSIGDLRNLILINLKDCISLGNLPRRAYKLKSMKTLILSGCSKIDNLEDIVQMKSLTTLIAENTAVKQVPFSIVSSKSIGYISLCGYEGLARNVFPSIIQSWMSPTMNPLSYIHPFCGTSSSLVCMDMENTNWGDLSPLLSNLSNLRSVLLQCDTEFQLSKQLHTILDDVYGVNFTKLEITSHASQISNHSLRSYLIGIGTYQEVFNTLSNSISEGLATNESCDVFLPGDNHPYWLSHMGEGHSVYFTMPEACHRIKGITLCVVYLSAPENIPTEYLISVVMVNYTKCTIQIYKRETVISFNDQDWQGMISHLGSGDKMEIFVTFGHGLLVKRTVVYLMLDESIDLMKLEPSAKAKKNIFARLTKRMGECSCMSRNRGFN 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02297 1035 ProSiteProfiles TIR domain profile. 17 187 IPR000157 GO:0007165
Pumo7g02297 1035 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 189 - -
Pumo7g02297 1035 Gene3D Ribonuclease Inhibitor 535 867 IPR032675 -
Pumo7g02297 1035 PRINTS Disease resistance protein signature 374 388 - -
Pumo7g02297 1035 PRINTS Disease resistance protein signature 683 699 - -
Pumo7g02297 1035 PRINTS Disease resistance protein signature 221 236 - -
Pumo7g02297 1035 PRINTS Disease resistance protein signature 284 298 - -
Pumo7g02297 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 433 IPR027417 -
Pumo7g02297 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 722 IPR044974 GO:0006952
Pumo7g02297 1035 Gene3D - 12 195 IPR035897 -
Pumo7g02297 1035 SUPERFAMILY L domain-like 480 807 - -
Pumo7g02297 1035 Pfam TIR domain 19 194 IPR000157 GO:0007165
Pumo7g02297 1035 Gene3D - 339 423 IPR042197 -
Pumo7g02297 1035 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 164 IPR035897 -
Pumo7g02297 1035 Gene3D - 238 337 IPR027417 -
Pumo7g02297 1035 SMART till_3 18 161 IPR000157 GO:0007165
Pumo7g02297 1035 Pfam NB-ARC domain 202 404 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02297 Pumo-Chr7 65533901 65539123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02297 10 728 WRKY Transcription Factor Family AT4G12020 28.364 1.87e-69 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02297 - - gmx:100813173 1498.41