Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02296 ATGGGAGTAACATTGGAAAGGGTTTTTACAACTTTACCTATTCAAAATTTTCACATGGGAGAAAATTTGCAGCTTTTCTGTTCAAAGTTAAATAGAAGGTATAAACAAGGATTGCCTTTAGAAGGCCAAGCAACTGTGAGATCATCTGCTATTGAAAGACAACAAGAAAAGAAGTCAAAGCCTGTTTATACAACTGCAAAAGTTGATGAGTTAAGAGAATGTCTGAGGAATCTCAAGCGTAATCATCAGGGTGAGGATGCCAGAGTCAGAAGGGCCTTTCAAACACTTTTAGTCTATGTTGGAAATGTTGCCAAGAATCCCAAGGAGGAAAAGTGCAGGAAAATTCGACTGAACAACCCATTATTCCAGGGCCAACCCTTAGGAATTTTGGGAGGGGGGGTGGCGACTGCCTTGGGCCCATGA 423 0.4137 MGVTLERVFTTLPIQNFHMGENLQLFCSKLNRRYKQGLPLEGQATVRSSAIERQQEKKSKPVYTTAKVDELRECLRNLKRNHQGEDARVRRAFQTLLVYVGNVAKNPKEEKCRKIRLNNPLFQGQPLGILGGGVATALGP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02296 140 Coils Coil 68 88 - -
Pumo7g02296 140 SUPERFAMILY PUG domain-like 71 124 IPR036339 -
Pumo7g02296 140 Gene3D - 73 134 - -
Pumo7g02296 140 PANTHER F13M7.16 PROTEIN 28 134 - -
Pumo7g02296 140 Pfam PUB domain 88 123 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02296 Pumo-Chr7 65500356 65502168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02296 28 134 C2H2 Transcription Factor Family AT1G04850 50.459 4.39e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02296 - K24348 gmx:100781260 172.94