Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02262 ATGATTGGCATGAGTCAGGTTGTCCAGTTCCTAATCCAGCTTCTTCAATCTGACTCTGATGTTCAATGCATAGCTGTTTTGGTAAATTTAGCTACTTCTGAAGTTGGAAGGGAGGAAATGGCTTCGATATTGGACACTGGTGAGCTCTTAGAACAGGAGCAAGCTGTCTCTTGTCTCCTAATTTTGTGCAATAGAAGTGAGGAATGTAGTGAGATGGTCCTGCAAGAAGGGGTTATACCAGCATTGTTTTCAATATCAGTGAATGGGACCACAAGAGGTAGAGAAAAAGCTCAGAAACTCTTGATGCTATTCCAAGAGCAGCGACGAGACCGTTCACCAGATAAGACACATCAGTGCCCACCTGAAACTAGTGATTTGTCTATGCCACCCCGCCGAAATGAAACCACTATGCAAGTCGTTTTTGAGAAGAAAGTGTGGGAAAGCTTTTAG 450 0.4356 MIGMSQVVQFLIQLLQSDSDVQCIAVLVNLATSEVGREEMASILDTGELLEQEQAVSCLLILCNRSEECSEMVLQEGVIPALFSISVNGTTRGREKAQKLLMLFQEQRRDRSPDKTHQCPPETSDLSMPPRRNETTMQVVFEKKVWESF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02262 149 PANTHER U BOX DOMAIN-CONTAINING 4 111 - -
Pumo7g02262 149 MobiDBLite consensus disorder prediction 119 133 - -
Pumo7g02262 149 SUPERFAMILY ARM repeat 6 102 IPR016024 -
Pumo7g02262 149 MobiDBLite consensus disorder prediction 108 133 - -
Pumo7g02262 149 Gene3D - 1 116 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02262 Pumo-Chr7 64404400 64404849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02262 1 122 U-box Gene Family AT1G67530 43.017 6.90e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02262 - - gmx:100794099 202.216