Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02261 ATGTCGTCTTCTTCATCCTCCAACACCCACTGGATCCACGATGTCTTCTTGAGCTTCAGAGGAGAAGACACGCGAAAGACTTTCGTGTCTCATCTCTATGCTGCCCTCTCAAATGCAGGAATCAACACTTTCATAGATGACAACCTTATTAAGGGAACGGAGTTGGGACCAGAACTTGTGCGAGCCATACAAAGGTCTCAGTTATCCATCGTCGTTTTCTCCAGTGACTATACTTCATCTAGGTGGTGTCTTGATGAGCTGTTCCAAATCATGGAATGCCGTAGAACTAACGGCCAAGTGGTTGTGCCCGTGTTTTGCGATGTTGATCCATCGGATGTACGTCATCAAAGGGGTGCTTTTGGAGAACGCTTGGAAGCACTTGCACATAGATGTTTACGAGAAGGGACCGGGACGCACGATGCAATCAGGAGTTGGAAGAGTGCACTCATGGAGGCCGCAAATATTCCAGGTTGGGATGCAAAGAATTTCAGGAATGAAGCTGACCTAGTGAAGCAAATTGTTGAGGACATTTTTGAAAAACTGGACATGGACTTATCTATTACTGAATTTCCAGTTGGATTAGAATCCCATGTGCAAGAAGTGATTGAGTTTATTAATAGTCAATCAAGCACAGGCTGTGTTATAGGGATCTGGGGAATGGGTGGATCGGGTAAAACAACCCTGGCGAAAGTCATCTACAATCAGCTTCTTCAAAGATTCAGGCGTAGAAGTTTCATTGAGAATATTAGAGAAGTTTGTAAAACAAATGGTAGAGCGTGTATTGATTTGCAAGAACAACTTCTTTCTGATCTCCGAATTAATACAAAGGAGAAGATACATAGCATTACCATGGGGATATCTGTGATCCAGAAAAGATTTTGTGGTGAAAGGGCTCTCGTTGTACTTGATGATGTGACTGAGTTTAAGCAATTGATAGCCCTATGTGGAAATCGTAAATGGATTGGTCAGGGAAGTGTACTCATTATTACAACAAGAGATGTACGCCTACTTTTTGAACTTAAAGCTAATCATGTGGTCCATATTTGTAGAATGGAGGAAATGAACAAAAATGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGACAAGCATACCCAAGAGAAGACTTGATTAAACCCTCAATGGACTTAGTTGCTTACTGTGGAGGACTACCACTAGCTCTTGAAGTCCTTGGATCTTACTTATTTGAAAGGACAAAAGAAGAATGGGAAAGTGTATTGTCAAAACTAAAGAAAATTCCCAATGATCAAGTTCAAGAGAAACTGAGAATAAGCTATGATGGTTTAGATTGTGAGGAAAAGAATATATTCCTTGACATGTGTTTTTTCTTTATTGGCAAGGACAGAGCTGATGTTATAGAGATACTTAAAGGTTGTGGCCTTCATCCTGAAATCGGAATAGCAATCCTGCTTGAAAGGAGCCTCATAAAGCTAGAAAAGAATAATACGATCAAAATTCATGATTTGCTACGTGACATGGGAAGAGAAATTGTTCGTCAAAGTTATCCTGCGGAACCTGAGAAGCGTAGTCGACTGTGGGTTCACCAAGAAGTACTTGATGTATTGTTAGAACATACTGGATTGAGAACCAATGATTCTAGTGGTTTTTCCCTTCCAGGTGACAATTATCCTTGTTGGAAAGCTTATATCAGTCAGGGGCATTCAGTACATTTTCAATTGCCTGAGGATAGTGATTGCTGCATGAAGGGAATGGTTTTGTGTGGCATTTATTCATCAACCTCCAAAAACATAGCAGTTGAATGTCTTGCTGGTTTATTGATTGTTAATTACACAAAGTGCACCATCCAAATTTTCAAGCAAGACACAATAATTTCCTTTAATGATGAAGATTGGCAGGGCGTAATATCAAATCTAATACCTGGCGACAATGTGGAGATTTTTGTAGCTCTTGGGCATGGATTGACAGTTATGAGCACAGCTGTCTATCTAATATATGGTCAGTCAATCGCTGTGAAAATGGACCCATCACCTAAAGTGAATGTGCAGCCATCAGCTAATGCGAGAAAACGGATGCATCACCAAATGTGA 2070 0.4063 MSSSSSSNTHWIHDVFLSFRGEDTRKTFVSHLYAALSNAGINTFIDDNLIKGTELGPELVRAIQRSQLSIVVFSSDYTSSRWCLDELFQIMECRRTNGQVVVPVFCDVDPSDVRHQRGAFGERLEALAHRCLREGTGTHDAIRSWKSALMEAANIPGWDAKNFRNEADLVKQIVEDIFEKLDMDLSITEFPVGLESHVQEVIEFINSQSSTGCVIGIWGMGGSGKTTLAKVIYNQLLQRFRRRSFIENIREVCKTNGRACIDLQEQLLSDLRINTKEKIHSITMGISVIQKRFCGERALVVLDDVTEFKQLIALCGNRKWIGQGSVLIITTRDVRLLFELKANHVVHICRMEEMNKNESLELFSWHAFRQAYPREDLIKPSMDLVAYCGGLPLALEVLGSYLFERTKEEWESVLSKLKKIPNDQVQEKLRISYDGLDCEEKNIFLDMCFFFIGKDRADVIEILKGCGLHPEIGIAILLERSLIKLEKNNTIKIHDLLRDMGREIVRQSYPAEPEKRSRLWVHQEVLDVLLEHTGLRTNDSSGFSLPGDNYPCWKAYISQGHSVHFQLPEDSDCCMKGMVLCGIYSSTSKNIAVECLAGLLIVNYTKCTIQIFKQDTIISFNDEDWQGVISNLIPGDNVEIFVALGHGLTVMSTAVYLIYGQSIAVKMDPSPKVNVQPSANARKRMHHQM 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02261 689 Gene3D - 9 177 IPR035897 -
Pumo7g02261 689 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Pumo7g02261 689 Pfam NB-ARC domain 195 423 IPR002182 GO:0043531
Pumo7g02261 689 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 538 IPR044974 GO:0006952
Pumo7g02261 689 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 183 - -
Pumo7g02261 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 446 IPR027417 -
Pumo7g02261 689 Gene3D - 353 437 IPR042197 -
Pumo7g02261 689 SMART till_3 12 155 IPR000157 GO:0007165
Pumo7g02261 689 ProSiteProfiles TIR domain profile. 11 181 IPR000157 GO:0007165
Pumo7g02261 689 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 158 IPR035897 -
Pumo7g02261 689 Gene3D - 178 348 IPR027417 -
Pumo7g02261 689 PRINTS Disease resistance protein signature 388 402 - -
Pumo7g02261 689 PRINTS Disease resistance protein signature 214 229 - -
Pumo7g02261 689 PRINTS Disease resistance protein signature 292 306 - -
Pumo7g02261 689 Pfam TIR domain 13 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02261 Pumo-Chr7 64404277 64411864 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02261 192 520 WRKY Transcription Factor Family AT5G45050 33.636 2.12e-50 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02261 - - gmx:100809413 740.339