Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02260 ATGGGCCCCACTCTCCCTTTCGACTTGATAAAAGAAATCCTCCTGAGATTGCCCGTCAGATCCATTCTGCGTTTCAAGTGTATTTGCAAGGCATGGCGTTCTCTAATCTCCGATCCCCAATTCGCCGTTTCCCATCACGACCTAGCCGCCGCGCCCTCCCATCGTCTCCTCCTCAGATCCGACGATTTCTACCTCGAATCCATTGACGTCGAAGCGCCGCTTTGGGCATGTCCCGATGCATTACATTTCCATTTCCGTATTCCGCCTCCACCTCCCCAACCCCACGGCGTGTTTGACTATTACGCCGACGATCACAGCAATGCAAAACACGAGATTTTGGGTTCGTGCAGAGGACTCGTGCTCTTGCAGTACTGGCAAACCTCTGATCTCATTGTATGGAATCCATCGACCGACTCCCGCGAGGAATTACGAGTCTTTGACAATGCAACATCCTATCCTCAGCTGTTTGGTTTTGGTTATGACCCATCAACTGATGACTACTTGCTCGTTGATATCGCATTGGAAATTGAAAGGAAGCCATTCTCGATTTTGTCCTTCAAAACTGGTTTGTGGGACAATGGCCATATGCAGGTTTCATACGGCATTCTCGACCAGGATAAATTCAGAGGTGGGTCGCTCCTCCATGATTCTCTACATTGGCTGGTTTTCTCCGAGGATAAACGGGTTCCTGTCATTCTGGCCTTTGATCTCGTACAGAGGAGTTTTTCGGAGATTCCTCTGTTAGATGATTTAACTACGGATTTATATGAACTGTATAGTTTGAGGGTAATCGGAGGATGTCTCGCTGTGTGTTGCTCGGTCCAAGGCACTGAAACAGCTGAAATATGGGTGATGAAACAATATAAAGTGCACACGTCTTGGACCAAGTCCGTTGTTTTAAATACTAATGGCATTCCTCACAATTGCTTTTCCCCGATGTGGATCACCAAAGATGGTGGGATTTTTGGATCAAATATCAGAGGAACATTAGAGAAAGTCAATGACAAAGGAGAGCTGCTTGAGCATCTCAAATATGGTCGACCTCAAAGGTTGTACAAAGACAATCTACATGTTGCTATGTATATAGAGAGTCTACTGCCAGTGAGTGTCATCGGGGGAAACAAGAAAAATCAGGAGTCTGAATCTACAAATTCAAAATCTGTAAATAGTGTCAGCTCTTGCAAGTTGAAGGGTGTCCAAGTGGTTCCTTTGGAAGAGAGCAGTATCTCAGACGAATTTGTGGAAAATGGAACTGAAAGTGTGTCTGGACAAGAGGAAGACACTGAGCAGTATTTTAGTTTTCTGAAAGTCTTGACTGAGGGGAACAATTGGAGGCGGCAATGTGGAGTGGTAGAACAGTTAAGGCTGTTGCTGAGGGATGATGAGGAAGCCAGGATTTTTATGGGGGCTAATGGGTTTGTTGAAGCACTTTTGCAGTTTTTGCAATCAGCTGTGTGTGAAGGTAATTTGATGGCTCTGGAAAGTGGAGCAATGGCTCTCTTCAACCTAGCTGTGAATAATAATAGGTCTGCTTTATATTTCTAG 1545 0.4537 MGPTLPFDLIKEILLRLPVRSILRFKCICKAWRSLISDPQFAVSHHDLAAAPSHRLLLRSDDFYLESIDVEAPLWACPDALHFHFRIPPPPPQPHGVFDYYADDHSNAKHEILGSCRGLVLLQYWQTSDLIVWNPSTDSREELRVFDNATSYPQLFGFGYDPSTDDYLLVDIALEIERKPFSILSFKTGLWDNGHMQVSYGILDQDKFRGGSLLHDSLHWLVFSEDKRVPVILAFDLVQRSFSEIPLLDDLTTDLYELYSLRVIGGCLAVCCSVQGTETAEIWVMKQYKVHTSWTKSVVLNTNGIPHNCFSPMWITKDGGIFGSNIRGTLEKVNDKGELLEHLKYGRPQRLYKDNLHVAMYIESLLPVSVIGGNKKNQESESTNSKSVNSVSSCKLKGVQVVPLEESSISDEFVENGTESVSGQEEDTEQYFSFLKVLTEGNNWRRQCGVVEQLRLLLRDDEEARIFMGANGFVEALLQFLQSAVCEGNLMALESGAMALFNLAVNNNRSALYF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02260 514 PANTHER OS02G0783600 PROTEIN 10 301 - -
Pumo7g02260 514 Pfam F-box domain 5 40 IPR001810 GO:0005515
Pumo7g02260 514 CDD F-box_AtFBW1-like 3 41 - -
Pumo7g02260 514 ProSiteProfiles F-box domain profile. 1 45 IPR001810 GO:0005515
Pumo7g02260 514 Pfam F-box associated 215 307 IPR006527 -
Pumo7g02260 514 SUPERFAMILY ARM repeat 427 510 IPR016024 -
Pumo7g02260 514 Gene3D - 4 41 - -
Pumo7g02260 514 SUPERFAMILY F-box domain 5 57 IPR036047 GO:0005515
Pumo7g02260 514 NCBIfam F-box protein interaction domain 115 321 IPR017451 -
Pumo7g02260 514 SMART fbox_2 5 45 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02260 Pumo-Chr7 64400928 64403773 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02260 379 510 U-box Gene Family AT1G67530 56.429 3.27e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02260 - - gmx:102663745 398.282