Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02237 ATGGAGAGATATAAAATTTTGAGAGAGCTTGGGGATGGTTCTTGCGGTCATGTATATAAAGCCCGTGATATGAGAACATATGAGATTGTTGCTGTTAAAAGGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACACAAATTTAAGAGAAGTTAAGGTCCTCCGTAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTCGTTAGAGAAAATAATGAACTATTTTTCATTTTTGAATACATGGACTGTAATCTTTATCAATTAATAAAGGAGAGAGAAAAGCCCTTTTCAGAGGAAGAGATACGGTGCTTTATGAGGCAAGTGCTACAAGGACTTAGTCACATGCACAAGAAAGGATTCTTTCATCGGGATTTAAAACCTGAGAATTTGCTGGTAACAAATGATGTTTTGAAAATCGCTGATTTTGGACTGGCTAGGGAAGTATCATCGATGCCTCCATATACTCAATATGTTTCCACACGGTGGTATCGAGCTCCAGAAGTTTTGTTGCGAGCCCCTTGTTATACTCCTGCTGTTGACATGTGGGCAGTTGGTGCTATATTAGCTGAGCTTTTTACTTTGACCCCCTTAGTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACGGCATTCTTGGTATGCCAGATTCCACTGCTTTCACCATAGGGGCAAACAACTCTCAGTTATTGGACCTAGTTGCTCATGAAGTTGTAAGTGTTCATGTTCCACCTGTGAAGCTTTCTAATATCATTCCAAATGCTAGTTTGGAAGCTATAGACTTGATCACACAACTGTTACATTGGGACCCATCAAGAAGGCCAGATGCAGATCAGTCATTGCAACATCCCTTTTTTTCATGTAACTTTCTCTTTGAAGCCTGTTCTTATTCACTTAATGTCTTCAATTTACTAACATATACTGGACAGGTGGATGCATGGGTTCCTTGTCCACTCAGCGATCCACTTGAGCTGAAGCTGAGTAGCAAGAGTGTAAAGCCCAGTGTTTCAAACTTAGATGTGGTCCAAAATGTATCTCAGGGTGTCAGAGAGAACATGCTATTTTGCTCAGATTTTAATGATCATTCAGACCAGTCAGTATTTTGGACGTTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCAGAGACTTCGTTGTCATTGTCATTCAGTTCAGTACAACAACATCCACCAATTGGAGTTCCACAGTCAGCAGGATTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACCACACCATTTTTGGCTCTCTCTTCTCCCTTCCAGCGTGGCCACTGCCTTTGA 1314 0.398 MERYKILRELGDGSCGHVYKARDMRTYEIVAVKRLKRKFCFWEEYTNLREVKVLRKMNHPNIIKLKEVVRENNELFFIFEYMDCNLYQLIKEREKPFSEEEIRCFMRQVLQGLSHMHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLRAPCYTPAVDMWAVGAILAELFTLTPLVPGESEIDQLYKIYGILGMPDSTAFTIGANNSQLLDLVAHEVVSVHVPPVKLSNIIPNASLEAIDLITQLLHWDPSRRPDADQSLQHPFFSCNFLFEACSYSLNVFNLLTYTGQVDAWVPCPLSDPLELKLSSKSVKPSVSNLDVVQNVSQGVRENMLFCSDFNDHSDQSVFWTLLSPDQNGVHNSAETSLSLSFSSVQQHPPIGVPQSAGFSFQPLQPNILTTPFLALSSPFQRGHCL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02237 437 ProSiteProfiles Protein kinase domain profile. 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02237 437 Pfam Protein kinase domain 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02237 437 SUPERFAMILY Protein kinase-like (PK-like) 1 289 IPR011009 -
Pumo7g02237 437 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Pumo7g02237 437 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 335 - -
Pumo7g02237 437 SMART serkin_6 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02237 437 Gene3D Transferase(Phosphotransferase) domain 1 83 294 - -
Pumo7g02237 437 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Pumo7g02237 437 CDD STKc_MAK_like 4 288 - -
Pumo7g02237 437 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 294 - -
Pumo7g02237 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02237 Pumo-Chr7 63407394 63415559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02237 1 289 Core Cell Cycle Gene Families AT3G48750 36.455 1.75e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pumo7g02237 Pkinase 8.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02237 K08829 K08830 gmx:100792842 753.821