Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02233 ATGGAAGCTAACGGGATTGGTGAACTCAAGATACCTTTGTTGCAGACTTCAGAAGAAGATGCCGCCGTTAGGACCGTTACGTTCCAACTGAGTGACATCAAGTGTGCCTCCTGTGTGAATTCCGTCGAGTCCGTCGTTAGGAGCCTTAACGGCGTCAAAAGCGTCTCCGTTTCGCCACTTGATGGCCGAGCCGCAATCAAGTTTGTCCCTAAGTTTGTTACAGTGAAACAAATTAAAGAAAGCATAGAGGAAAGTGGGTTTGGCATTGATGAGCTTCATGAGCAGGACATAGCCGTGTGCCGAGTGAGGATTAAAGGAATGGCATGCACAAGCTGCTCTGAGTCTGTTGAGAATGCCCTTCAAATGGTTGAAGGGGTGAAAAAGGCAATTGTTGGTCTCGCTTTGGAGGAGGCAAAAGTGCACTTTGATCCTAATCTCACTGATGTTGACAAGATAATTGAGGCCATAGAAGATACGGGTTTTGGGGCTGATCTTATTAGCTCTGGGAATGATGCAAACAAAGTGCATCTAAAGCTTGAAGGGGTTGATTCTGCAGAAGATGTAAATGCAGTAATGTCTTCTCTTGAGTTAGCTATGGGGGTGAACCATGTTGAGATGGATTTGTCAGAACATAAAGTTACTGTTAGTTATGATCCAGACGTTACAGGTCCAAGGTTTCTCATTCACTGTGTTCAGGAAGCTAGCTGTGGCCCCAAGAAGTATCAAGCAACCTTGTACTCTCCTTCGGGGCAAAGAGAAAGGGATAAGGTGAATGAAATCCGTATATATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCTGTTCCTGTGTTTGTATTTGCCATGGTGCTTCCCATGCTTCCTCCTTATGGCAACTGGTTAAACTACAAGATCCACAATATGCTTACTCTTGGGTTGTTTTTAAGATGGATTCTTAGCACGCCTGTGCAGTTCATAGTTGGCAAAAGGTTTTATGTGGGATCATATCATGCACTGAAGCGAAAATCTGCTAACATGGACGTGCTGGTTGCGCTGGGCACAAATGCTGCTTATTTTTACTCTCTCTATATTCTAATAAAAGCACTGACTTCAGATACATTTGAAGGACAAGATTTCTTTGAGACAAGTTCCATGCTGATATCCTTTATTCTATTAGGTAAGTATTTGGAAATTGTGGCTAAAGGGAAAACATCAGATGCTTTAGGAAAGCTGACTCAACTTGTTCCTGATAAAGCTTATTTAGTAGCAACTGATACTGATGGAAATATCATCAGAGAGACAGAAATTGACACTCAACTTATACAAAAAAATGACATAATTAAGATTGTTCCCGGGGCCAAAATTCCTGTTGATGGTGTAGTTATAAAAGGGCAAAGCTATGCTAATGAAAGTATGATCACTGGGGAGGCAAAACCTGTTGATAAAAGCCCAGGAGACAAGGTTATCAGTGGAACCATTAATGAGAATGGCTGCTTACTGGTTAAGGCCACACATGTTGGATCCGACACTGCACTTTCTCAAATAGTTCAACTCGTTGAAGCTGCTCAACTGGCCAAAGCACCAGTTCAAAAACTTGCTGACCATATTTCAAGGGTTTTTGTTCCAATAGTGGTTGTTGCAGCACTAATAACTTGGCTTGGATGGTTCATTCCCGGGGAAGCTGGTATTTACCCTAAACATTGGATACCAAAAGCAATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTTCTGGTTGTTGCTTGCCCATGTGCTCTGGGTCTTGCAACACCAACTGCAGTCATGGTTGCTTCAGGCATTGGAGCTTCTCAAGGTGTTCTCATCAAGGGTGGAGATGCACTGGAAAAGGCACACAAGGTAAAAATTGTTGTGTTTGATAAGACTGGGACACTAACAGTTGGGAAGCCAGAGGTAGTTAGTGCAGTGCTGTTTTCTGAATTTTCTATGGAGGAATTATGTGACATGACAATTGCTGTGGAGGCAAGTAGCGAGCACCCAATAGCTAAAGCTGTTGTGGCACATGCAAAGAGGCTGCGCCAGAAATTTGGTTCTTGCACTGAGGAAGTCCCAGATGTGGATGATTTTGAGGTACACATGGGAGCTGGTGTAAGTGGAAAGGTTGGTGATAGAACAGTTGTGGTTGGAAACAAGAGACTCATGCATGCTTGTAATGTTCCAATATATTCTGAGGTTGAGAAGTACATCTCTGAAAATGAAATTCTGGCTAGAACTTGTATTTTGGTTTCAATTGATGGAAAGATTGCCGGTGCATTCTCTGTAACTGATCCTGTAAAACCAGAGGCTAAACGTGTCATATCTTTTCTCCACTCCATGGGCATCTCAAGCATCATAGTGACTGGTGATAACTGTGCTACTGCAACTGCTATTGCAAATGAAGTGGGTATTGATGAGGTCTTTGCTGAGACAGATCCAGTGGGCAAAGCAGATAAGGTGAAAGACTTGCAGATGAAAGGAATGACTGTGGCAATGGTAGGTGATGGAATAAACGACTCGCCAGCCCTGGTTGCTGCTGATGTTGGCATGGCAATTGGTGCTGGAACTGACATAGCTATAGAAGCAGCTGATATTGTTCTAATCAAAAGCAGTTTGGAAGATGTGATCACAGCCATAGATCTGTCAAGAAAGACCATGTCGCGCATCCGGCTGAACTACATCTGGGCTCTTGGTTACAACATTCTAGGCATGCCAATTGCTGCTGGAGTCTTGTACCCCTTTGCTGGAATCAGATTGCCCCCATGGCTTGCTGGTGCTTGCATGGCTGCTTCCTCTCTCAGTGTGGTTTCTTCGTCTCTTTTGCTGCAGTTCTATAAAAAACCTCTGCATATAGAATCCTCTTGA 2865 0.4339 MEANGIGELKIPLLQTSEEDAAVRTVTFQLSDIKCASCVNSVESVVRSLNGVKSVSVSPLDGRAAIKFVPKFVTVKQIKESIEESGFGIDELHEQDIAVCRVRIKGMACTSCSESVENALQMVEGVKKAIVGLALEEAKVHFDPNLTDVDKIIEAIEDTGFGADLISSGNDANKVHLKLEGVDSAEDVNAVMSSLELAMGVNHVEMDLSEHKVTVSYDPDVTGPRFLIHCVQEASCGPKKYQATLYSPSGQRERDKVNEIRIYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYKIHNMLTLGLFLRWILSTPVQFIVGKRFYVGSYHALKRKSANMDVLVALGTNAAYFYSLYILIKALTSDTFEGQDFFETSSMLISFILLGKYLEIVAKGKTSDALGKLTQLVPDKAYLVATDTDGNIIRETEIDTQLIQKNDIIKIVPGAKIPVDGVVIKGQSYANESMITGEAKPVDKSPGDKVISGTINENGCLLVKATHVGSDTALSQIVQLVEAAQLAKAPVQKLADHISRVFVPIVVVAALITWLGWFIPGEAGIYPKHWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGIGASQGVLIKGGDALEKAHKVKIVVFDKTGTLTVGKPEVVSAVLFSEFSMEELCDMTIAVEASSEHPIAKAVVAHAKRLRQKFGSCTEEVPDVDDFEVHMGAGVSGKVGDRTVVVGNKRLMHACNVPIYSEVEKYISENEILARTCILVSIDGKIAGAFSVTDPVKPEAKRVISFLHSMGISSIIVTGDNCATATAIANEVGIDEVFAETDPVGKADKVKDLQMKGMTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLIKSSLEDVITAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGVLYPFAGIRLPPWLAGACMAASSLSVVSSSLLLQFYKKPLHIESS 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02233 954 Gene3D - 394 516 - -
Pumo7g02233 954 FunFam Copper-transporting ATPase HMA5 97 168 - -
Pumo7g02233 954 SFLD p-type atpase 608 885 IPR044492 -
Pumo7g02233 954 Pfam E1-E2 ATPase 410 604 - -
Pumo7g02233 954 SUPERFAMILY HAD-like 624 939 IPR036412 -
Pumo7g02233 954 SFLD Haloacid Dehalogenase 608 885 - -
Pumo7g02233 954 ProSitePatterns Heavy-metal-associated domain. 104 133 IPR017969 GO:0046872
Pumo7g02233 954 SUPERFAMILY HMA, heavy metal-associated domain 169 238 IPR036163 GO:0046872
Pumo7g02233 954 Gene3D - 19 90 - -
Pumo7g02233 954 SUPERFAMILY Calcium ATPase, transduction domain A 426 512 IPR008250 -
Pumo7g02233 954 ProSiteProfiles Heavy-metal-associated domain profile. 24 90 IPR006121 GO:0046872
Pumo7g02233 954 NCBIfam heavy metal translocating P-type ATPase 339 942 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pumo7g02233 954 ProSiteProfiles Heavy-metal-associated domain profile. 98 164 IPR006121 GO:0046872
Pumo7g02233 954 Gene3D - 172 243 - -
Pumo7g02233 954 SUPERFAMILY HMA, heavy metal-associated domain 95 169 IPR036163 GO:0046872
Pumo7g02233 954 SUPERFAMILY HMA, heavy metal-associated domain 22 90 IPR036163 GO:0046872
Pumo7g02233 954 Gene3D - 617 883 IPR023214 -
Pumo7g02233 954 PRINTS P-type cation-transporting ATPase superfamily signature 856 868 - -
Pumo7g02233 954 PRINTS P-type cation-transporting ATPase superfamily signature 833 852 - -
Pumo7g02233 954 PRINTS P-type cation-transporting ATPase superfamily signature 758 769 - -
Pumo7g02233 954 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Pumo7g02233 954 PRINTS P-type cation-transporting ATPase superfamily signature 780 790 - -
Pumo7g02233 954 PRINTS P-type cation-transporting ATPase superfamily signature 626 640 - -
Pumo7g02233 954 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 15 949 - -
Pumo7g02233 954 CDD HMA 27 88 IPR006121 GO:0046872
Pumo7g02233 954 Gene3D - 637 766 IPR023299 GO:0000166
Pumo7g02233 954 FunFam ATPase copper transporting beta 21 92 - -
Pumo7g02233 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 628 634 IPR018303 -
Pumo7g02233 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 371 618 IPR023298 -
Pumo7g02233 954 NCBIfam HAD-IC family P-type ATPase 379 910 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g02233 954 FunFam Probable copper-transporting ATPase HMA5 755 890 - -
Pumo7g02233 954 CDD HMA 102 163 IPR006121 GO:0046872
Pumo7g02233 954 ProSiteProfiles Heavy-metal-associated domain profile. 173 239 IPR006121 GO:0046872
Pumo7g02233 954 CDD P-type_ATPase_Cu-like 267 929 - -
Pumo7g02233 954 FunFam Copper-transporting ATPase 1, putative 394 516 - -
Pumo7g02233 954 Pfam haloacid dehalogenase-like hydrolase 622 847 - -
Pumo7g02233 954 Pfam Heavy-metal-associated domain 27 87 IPR006121 GO:0046872
Pumo7g02233 954 Pfam Heavy-metal-associated domain 101 161 IPR006121 GO:0046872
Pumo7g02233 954 Gene3D - 99 169 - -
Pumo7g02233 954 NCBIfam copper ion binding protein 26 88 IPR006122 GO:0005507
Pumo7g02233 954 NCBIfam copper ion binding protein 102 162 IPR006122 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02233 Pumo-Chr7 63247318 63254465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02233 18 952 Primary Pumps ATPases AT1G63440 56.642 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02233 K17686 - gmx:100793894 1761.12