Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02231 ATGGACAAGGATTTCGACATGCCGGCGGCGGAGCCCATGGGCGACGACTTCGACTTCGCCGGCGGCGACGACGACGACGACCTCGACAACAGCAGCAACCCCGTCCTTAAGGTCGGCGAGGAGAAGGAGATTGGGCAACAGGGCCTGAAGAAGAAACTCCTCAAGGAAGGTGAAGGATGGGACACCCCTGAAGTTGGTGATGAAGTTCAAGTTCACTATACTGGGACGTTGCTTGATGGCACCAAGTTTGATTCCAGCAGAGATAGGGGAAATCCTTTCAGTTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACGATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCAGCTGAGCTAGCTTATGGTGAATCTGGTTCTCCTCCAACAATCCCTCCCAATGCAACTCTTCAATTTGATGTGGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGACGGAGGTTTATTTAAGAAGATACTTACTGAGGGAGAGAAATGGGAGAACCCCAAGGATCTTGATGAAGTTTTAGTGAAGTACGAAGCACATCTTGAAGATGGAACTCCTGTGGCAAAATCTGATGGAGTGGAGTTCACAGTCAAAGATGGTCATTTTTGTCCTGCTTTGTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGCTTCTGACAGTGAAGCCACAATATGGATTTGGTGAGAAGGGTAAGCCAACGCATGGTGACGAAGGTGCAGTTCCACCAAATGCAACATTGCAGATTACTCTTGAGTTAGTTTCTTGGAAGACTGTGTCAGAAGTAACTGAGGACAAGAAGGTCATTAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCGCCCAAACGAAGGAGCCATTGTGAAATTGAAAGTAATTGGTAAGCTGCAAGATGGTACTTTGTTTTTGAAAAAGGGTCACGATGATGAAGGGGAGCTGTTTGAATTCAAAACTGATGAGGAGCAAGTAATTGATGGGCTTGACAGAGCTGTTTTGACTATGAAGAAGGGTGAGGTAGCATTGTTGACTATTGCGCCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCAGGAACTTGCGGTGGTTCCACCAAACTCCACTTTGTATTACGAGGTTGAGCTAGTATCATTTGAGAAGGAAAAGGAATCCTGGGACATGGACACGCCAGAGAAGATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGCATTATTTAAAGCCGGTAAATATTCAAGAGCTTCTAAAAGATACGAGAAGGCTGTAAAGTTCATAGAGTATGATACCGCCTTCAGCGAAGAGGAGAAGAAGATCTCCAAGGCCTTGAAGGTTGCCTGTAATCTAAATGATGCAGCATGCAAGTTGAAACTAAAAGATTACAAACAAGCAGAGAAATTGTGCACAAAGGTACTGGAACTTGAGAGTACTAACGTGAAGGCTCTCTACAGAAGGGCCCAGGCATATATCGAGTTGGCTGATTTAGATTTGGCTGAATTCGATATTAAGAAAGCTCTTGAGATTGACCCTAACAACAGGGATGTCAAGCTTGAGTACAAGACTTTGAAGGAAAAGATGAAGGAGTACAACAAAAAAGAGGCAAAATTTTATGGAAATATGTTCAACAAACTGCACAAGCTAGATTCTCTTGACAGTAATAAACCAGCGTCGAAGGATGCGCAACCCATGAACATCGACAGCGAGGCATAA 1749 0.4437 MDKDFDMPAAEPMGDDFDFAGGDDDDDLDNSSNPVLKVGEEKEIGQQGLKKKLLKEGEGWDTPEVGDEVQVHYTGTLLDGTKFDSSRDRGNPFSFTLGQGQVIKGWDQGIITMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKILTEGEKWENPKDLDEVLVKYEAHLEDGTPVAKSDGVEFTVKDGHFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKPTHGDEGAVPPNATLQITLELVSWKTVSEVTEDKKVIKKILKEGEGYERPNEGAIVKLKVIGKLQDGTLFLKKGHDDEGELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTLYYEVELVSFEKEKESWDMDTPEKIEAAGKKKEEGNALFKAGKYSRASKRYEKAVKFIEYDTAFSEEEKKISKALKVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYIELADLDLAEFDIKKALEIDPNNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFNKLHKLDSLDSNKPASKDAQPMNIDSEA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02231 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 182 271 IPR001179 GO:0003755
Pumo7g02231 582 FunFam Peptidylprolyl isomerase 39 157 - -
Pumo7g02231 582 Gene3D - 272 393 IPR046357 GO:0003755
Pumo7g02231 582 FunFam Peptidylprolyl isomerase 272 394 - -
Pumo7g02231 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 389 IPR001179 GO:0003755
Pumo7g02231 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 177 268 IPR001179 GO:0003755
Pumo7g02231 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 62 151 IPR001179 GO:0003755
Pumo7g02231 582 SUPERFAMILY FKBP-like 275 409 - -
Pumo7g02231 582 Gene3D - 39 157 IPR046357 GO:0003755
Pumo7g02231 582 Pfam Tetratricopeptide repeat 492 525 IPR001440 GO:0005515
Pumo7g02231 582 Coils Coil 525 545 - -
Pumo7g02231 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 299 392 IPR001179 GO:0003755
Pumo7g02231 582 SUPERFAMILY FKBP-like 43 159 - -
Pumo7g02231 582 ProSiteProfiles TPR repeat profile. 492 525 IPR019734 GO:0005515
Pumo7g02231 582 FunFam Peptidylprolyl isomerase 397 552 - -
Pumo7g02231 582 Gene3D - 158 271 IPR046357 GO:0003755
Pumo7g02231 582 SMART tpr_5 409 442 IPR019734 GO:0005515
Pumo7g02231 582 SMART tpr_5 458 491 IPR019734 GO:0005515
Pumo7g02231 582 SMART tpr_5 492 525 IPR019734 GO:0005515
Pumo7g02231 582 SUPERFAMILY TPR-like 398 557 IPR011990 GO:0005515
Pumo7g02231 582 PANTHER PEPTIDYLPROLYL ISOMERASE 41 155 - -
Pumo7g02231 582 SUPERFAMILY FKBP-like 158 274 - -
Pumo7g02231 582 Gene3D Tetratricopeptide repeat domain 395 552 IPR011990 GO:0005515
Pumo7g02231 582 MobiDBLite consensus disorder prediction 1 50 - -
Pumo7g02231 582 FunFam Peptidylprolyl isomerase 158 271 - -
Pumo7g02231 582 MobiDBLite consensus disorder prediction 561 582 - -
Pumo7g02231 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 66 154 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02231 Pumo-Chr7 63195855 63201285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02231 36 566 Calmodulin-binding Proteins AT3G25230 84.746 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02231 K09571 - gmx:100794411 1038.48