Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02221 ATGGCATCTTCATCCTACGCCTCCTGCTGGGTCTATGACGTGTTTTTGAGCTTTAAAGGAGAAGACACGCGCAGGACTTTGGTGTCTCATCTCTATGCTGCACTCTCAAATGCGGGAATCCACACTTTCATCGATCACGAGCTTCGCAAGGGAAAGGGGTTGGGACCAGAACTATTTGGAGCCATAAAAGGGTCTCGGATATCCATCGTGGTTTTCTCCACCAACTACACTTCATCTAGGTGGTGTCTAAATGAGCTCGTCGAAATCATGGAACGTCGTACAACTTATGGCCTGGTGGTTGTGCCAGTATTTTACGACGTTGATCCATCGGATGTTCGTCATCAAACAGGTGCTTTTGGGAATAACTTGTCAGAAGTTATACAAAATTGTATGTCATCAACATATTTGCTGCCAAACATGTTTGATATGTTTACGAGTTGGAAGAGTGCACTCAAGGAGGCTGCAGATTTGGTCGGTTGGGATGCAAGGAATTTCAGGAGTGAAGGTGACCTAGTGAAGCAAATTGTTGAGGACATTTCTCAAAAACTAGACACCGGATTATTGTCTATTCCCGAATTCCCAGTTGGATTAGAATCCAGAGTCCAAGAAGTGATTGACTTTGTTAATGGTCAATCAGACAGAGGTTGTGTTGTAGGGATCTGGGGAATGGGTGGATTGGGTAAAACAACCCTGGCCAAAGTCTTCTACAATCAGATTCACTGGAGATTTCAGTGTAGCAGTTTCATTGAAAATATTAGAGAAGTTTGTGAAAATGATAGTAGAGGCTGTATCTATTTGCAACAACAACTTCTTTCTGATCTCCTAAATAAAACAATGAACAAAATACATAGCATTGAGATGGGGATAACTAAGATCAAGAACAGACTTCGTGGAGTAAGGGCTCTCATTGTACTTGATGATGTGACTGAGTTTGAGCAATTGAAAGCCCTATGTGTAAATCATCAATGGATTGGTCGAAGAAGTGTAATAATCATTACAACCAGAGATGTACGCCTACTTAATGTACTTAAAGTTAATCATGTAGTCCATATTTGTAGAATAAAGGAAATGGACAAAAATGAATCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGACAAGCAAGTCCAAGAGAAGACTTGATTATACTCTCAGCGGACATAGTTGCATACTGTGGAGGACTACCGCTAGCTCTTCAAGTCCTTGGATCTTACTTGTTTGATAGGAAGAAAGTAGAATGGGAAGCTGTATTGTCAAAACTAAAGGAAATTCCCAATGATCAAGTACAAGAGAAGCTGAGAATAAGCTATGATCGTTTGGATAGTAAGGAAAAGAATATATTCCTTGACATATGTTTTTTCTTTATTGGCAAGGACAGAGCCGATGTTACGGAGATACTAAAAGGCTGTGGCCTTCATCCTGAAATTGGAATGCCTATCCTGGTTGAACGGAGCCTCATAAAGCTTGATAAGAATAACAAGCTCAAAATGCACGATTTGCTACGTGACATGGGAAGAGAAATTGTTCGTCAAAGTTCTCCAGAGGAACCTGAGAAGCGTAGTCGATTGTGGATTCACGAAGAAGTACTTGATGTGTTGTCAGAACACACTGGAACAAGAGCAATTGAGGGCTTGGCTTTGAAGTTGCAAGGAACTAGTGTACTTCACTTCAATACCAAAGCATTTGAGAAAATGAAGAAATTGAGACTTTTGCAAATTGATCAAGTACAACTTGTTGGAGATTATGAGTATCTTAACAAGAACCTAAGATGGGTTTGTTGGCAAGGATTTCCTCTAAAACACATACCAGACAACTTGTATCAGGAAAATGTAATTTCTATTGAATTAAAATATAGTAATATTAGACTAGTATGGAAGGAGCCTCAGTTTCTGCAGAGGCTAAAGATCCTCAATCTTAGCCATTCAAGGAACTTGATGCACACCCCTGAGTTTTCAAAACTGCCAAATCTTGCAAAGCTCATTCTCAAAGATTGTCCAAGCTTGTCTGAGGTGCACCAATCCATCGGAGATCTAAGTAATATTCTTGAGATAAATTTGATGGACTGTACAAGCCTTAGCAATCTTCCAAGGAGGATCTATCAGTTGAAATCTTTGCAAACTCTCATCTTTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGATATAGTGCGGATGGAATCCTTGACTACACTGATTGGAAAAGATACATCTGTAAAAGAAATGCCTCGTTCAATATTAAGATTAAAAAGCATTGGATATATATCCCTCTGTGGACTTGAAGGAGTAGCACGTGATGTTTTTCCTTCTCTCATATGGTCTTGGATGTCACCAACAGCAAATCTCAGATCTTGTACTCAACCATATGGGAGCATGTCAACTTCTCTAATCTTCATGGATATACAGCATAGTAATTTGGGTGACCTGTTGCCAATGCTTGTGGGACTTTCAAAACTTCGAAGTATTTTAGTGCAGTGCGACTCAAAGTTTCAACTAACCCAAGAATTAAGAAAAATTATGGATGACTTATGTGATGTAAAAGTTACAGAATTGGAAAGAACATCATATGCATCACAAATTTCAGAAAATTCCATGGAATCTTATTTAATTGGAATGGGAAGCTATGGCCAACTCATCAATATGCTTAGCAAGAGAATATATGAGGGATTGAGAACCAATGACTCTGATGATTTTCCCCTTCCTGGTGACAATTATCCTTATTGGTTAGCTCATATTGGTCAAGGACATTCAGTACATTTTCAATTGGCTGAGAATAGTGATTGTTGCATGAAGGGAATGATTTTAAGTGTTGTTTATTCATCATCCTCAGAAAAGATGGCAGTTGAATGTCTTGCTGGTGTCTTGGTTGTTAATTACACAAAGTGCACCGTTCAAATATACAAGCAAGACACAATAATTTCCTTTAATGATGAAGATTGGCAAGGCCTATTATCAAATCTAAGACCTAGTGACAATGTGGAGATTTTTGTAGTTTATGGGCATGGATCAACTGTTATGAAGACAGGTGTCTATCTTCTTTATTGA 3042 0.3892 MASSSYASCWVYDVFLSFKGEDTRRTLVSHLYAALSNAGIHTFIDHELRKGKGLGPELFGAIKGSRISIVVFSTNYTSSRWCLNELVEIMERRTTYGLVVVPVFYDVDPSDVRHQTGAFGNNLSEVIQNCMSSTYLLPNMFDMFTSWKSALKEAADLVGWDARNFRSEGDLVKQIVEDISQKLDTGLLSIPEFPVGLESRVQEVIDFVNGQSDRGCVVGIWGMGGLGKTTLAKVFYNQIHWRFQCSSFIENIREVCENDSRGCIYLQQQLLSDLLNKTMNKIHSIEMGITKIKNRLRGVRALIVLDDVTEFEQLKALCVNHQWIGRRSVIIITTRDVRLLNVLKVNHVVHICRIKEMDKNESLELFSWHAFRQASPREDLIILSADIVAYCGGLPLALQVLGSYLFDRKKVEWEAVLSKLKEIPNDQVQEKLRISYDRLDSKEKNIFLDICFFFIGKDRADVTEILKGCGLHPEIGMPILVERSLIKLDKNNKLKMHDLLRDMGREIVRQSSPEEPEKRSRLWIHEEVLDVLSEHTGTRAIEGLALKLQGTSVLHFNTKAFEKMKKLRLLQIDQVQLVGDYEYLNKNLRWVCWQGFPLKHIPDNLYQENVISIELKYSNIRLVWKEPQFLQRLKILNLSHSRNLMHTPEFSKLPNLAKLILKDCPSLSEVHQSIGDLSNILEINLMDCTSLSNLPRRIYQLKSLQTLIFSGCSKIDKLEEDIVRMESLTTLIGKDTSVKEMPRSILRLKSIGYISLCGLEGVARDVFPSLIWSWMSPTANLRSCTQPYGSMSTSLIFMDIQHSNLGDLLPMLVGLSKLRSILVQCDSKFQLTQELRKIMDDLCDVKVTELERTSYASQISENSMESYLIGMGSYGQLINMLSKRIYEGLRTNDSDDFPLPGDNYPYWLAHIGQGHSVHFQLAENSDCCMKGMILSVVYSSSSEKMAVECLAGVLVVNYTKCTVQIYKQDTIISFNDEDWQGLLSNLRPSDNVEIFVVYGHGSTVMKTGVYLLY 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02221 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 450 IPR027417 -
Pumo7g02221 1013 Pfam NB-ARC domain 198 437 IPR002182 GO:0043531
Pumo7g02221 1013 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 185 - -
Pumo7g02221 1013 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 160 IPR035897 -
Pumo7g02221 1013 Gene3D Ribonuclease Inhibitor 531 870 IPR032675 -
Pumo7g02221 1013 SUPERFAMILY L domain-like 510 823 - -
Pumo7g02221 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 757 IPR044974 GO:0006952
Pumo7g02221 1013 Pfam TIR domain 12 186 IPR000157 GO:0007165
Pumo7g02221 1013 Gene3D - 9 182 IPR035897 -
Pumo7g02221 1013 PRINTS Disease resistance protein signature 217 232 - -
Pumo7g02221 1013 PRINTS Disease resistance protein signature 628 644 - -
Pumo7g02221 1013 PRINTS Disease resistance protein signature 295 309 - -
Pumo7g02221 1013 PRINTS Disease resistance protein signature 391 405 - -
Pumo7g02221 1013 Gene3D - 183 350 IPR027417 -
Pumo7g02221 1013 SUPERFAMILY "Winged helix" DNA-binding domain 427 532 IPR036390 -
Pumo7g02221 1013 Gene3D - 356 440 IPR042197 -
Pumo7g02221 1013 SMART till_3 11 157 IPR000157 GO:0007165
Pumo7g02221 1013 ProSiteProfiles TIR domain profile. 10 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02221 Pumo-Chr7 62704172 62710711 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02221 6 748 WRKY Transcription Factor Family AT4G12020 29.188 3.35e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02221 - - gmx:100809413 1600.49