Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02216 ATGTCGTCGTCTTCATCCTCCCCCACCCACTGGATCTACGACGTGTTCATCAGCTTCAGAGGAGAGGACACGCGTAAGACTTTCGTTGCTGATCTCAATGCTGCCCTCTCAAATAAGGGAATCTTGACTTTCACCGATGACGAGCTTCCCAAGGGGATGGGGATAAAACCAGAACTAGTGCGAGCCATAGAAGGGTCTCGGATATCCATCGTCGTTTTCTCCGAAAACTATGCTTCATCTAGGTGGTGTCTTGATGAGCTGCTCAAAATCATAGAATGCAATAGAAGATACGGCCAGTTGGTTCTGCCCGTATTTTACAAAGTTGATCCATCGTCTGTACGTCATCAAACGGGTGCTTTTGGAGAGCACTTGAAAGCACATGAAGTGACGTCCAATATGTTCATAAATTGGAGGAATGCACTCATAAAGGCTGCAAATTTTGCTGGTTGGTATTCAAACAATTTCAGGACTGAAGGTGAGCTAGTGGAGGACATTGTGGAGATAATTTTTGAAAGACTTGACAAGGACTTATTGTCTATTACCGAATTCCCAGTTGGATTAGAATCCCGTGTGCAACAAGTGATTGAGTTTATTGACGATCAACCATACGGCAAAGGTTGTGTTATAGGGATCTTGGGGATGGGGGATTGGAATCGTCGGAGATTCAAGCATAGATGTTTCATTGAAAATATTAAAGAAGTTGATGTAAAAAATAGTAAAGAGTGTATTGATTTGCAAGAGAAACTTCTTTCTGGTCTTCGAATTGATACAACGGAGAAGATACATAGCAGTGCGATGGGAACAGCTATGATCGAGAAAAGCCTTGTTGGAAGAAGGGCTCTCATTGTACTTGATGACGTGACTGACTTTGAGCAATTAAAAGTCCTATGTGGAAATATTGAAAGCCTTCTTCAAAAAAGTGCAATCATCATCACAACCCGAGATGAACACCCGCTTAAAGTTCTTGAAGCTAATCGTCATAAGGTCCACATCTGTAGAATAAAGGAATTGGACGAAACTGAGTCCCGTAAGCTTTTCAGGTGGCATGCCTTTAGAGAAGAAAGTCCAACAGAAGACTTGATTGAACTCTCAGAGAAGGTTGCTGCTTACTTTGGAGGAGTGCCACTGGCTCTTGAAGTCCTTGGATCTTTCTTATTACCTGAGAGGAGGAAAGAACAATGGGAAAGTGTATTGTCAAAACTGAAGAAAATTCCCAATCACAAAGTGCAAGAGAAACTGAAAATAAGTTATGATGCTTTAGATTCTGACGAAAAGGAGATATTCCTTGACGTATGTTTTTTCTTTATTGGCAAGGGCAGAACAGATGTTATAGAGATATTAAAAGGCTGTGACCTTGATCCAGAGATTGGATTAACAACACTGGTTGAAAGGAGCCTCATAAAGCTAAAAAAGAATAACAAGCTCAACATGCATGATTTGATACGTGATATGGGGAGAGAAATTGTTCGTCAAGAGTCTAAAAAGGAGCCTGAGAAGCGGAGTCGATTGTGGTTTCACCAAGAAGTATTTGATGTTTTGTCAGAAAAAACCGGAACAAAAGCAATTGAGGGCTTGACTTTAAAGTCGCAAACAAATAGTCGACTTCAATTCAATACGGAAGCTTTTAAGAAAATGAAGAAATTGAGACTTTTGCAACTTGATCATGTACAACTTGATGGAGATAATTATGGGTATCTTAACAAAAACCTAAGATGGGTTTGTTGGCAAGGATTTCCTTTAAAACGCATACCAGGCAACTTATATCAGGGAAATGTAATTTCTATTGAACTAAAACATAGTAATATTAGACAAGTATGGAAGGAGCCCCAGTTGCTGGAGAGGCTAAAGATCCTCAATCTTAGCCATTCAAGGAACTTGATACACACCCCTGATTTTTCAAAACTACCAAATCTTGCAAAGCTCATTCTCAAAGATTGTACAAGCTTGTCTGAGGTGCACCAATCCATTGGAGATCTAACTAATCTTCTTATGATAAATTTGATGTCATATGGTCTTGGATGTCTCCAACAGCAAATCTTGTTGGGAGCATGTCAACTTCTCAAATCTCCATGA 2073 0.4009 MSSSSSSPTHWIYDVFISFRGEDTRKTFVADLNAALSNKGILTFTDDELPKGMGIKPELVRAIEGSRISIVVFSENYASSRWCLDELLKIIECNRRYGQLVLPVFYKVDPSSVRHQTGAFGEHLKAHEVTSNMFINWRNALIKAANFAGWYSNNFRTEGELVEDIVEIIFERLDKDLLSITEFPVGLESRVQQVIEFIDDQPYGKGCVIGILGMGDWNRRRFKHRCFIENIKEVDVKNSKECIDLQEKLLSGLRIDTTEKIHSSAMGTAMIEKSLVGRRALIVLDDVTDFEQLKVLCGNIESLLQKSAIIITTRDEHPLKVLEANRHKVHICRIKELDETESRKLFRWHAFREESPTEDLIELSEKVAAYFGGVPLALEVLGSFLLPERRKEQWESVLSKLKKIPNHKVQEKLKISYDALDSDEKEIFLDVCFFFIGKGRTDVIEILKGCDLDPEIGLTTLVERSLIKLKKNNKLNMHDLIRDMGREIVRQESKKEPEKRSRLWFHQEVFDVLSEKTGTKAIEGLTLKSQTNSRLQFNTEAFKKMKKLRLLQLDHVQLDGDNYGYLNKNLRWVCWQGFPLKRIPGNLYQGNVISIELKHSNIRQVWKEPQLLERLKILNLSHSRNLIHTPDFSKLPNLAKLILKDCTSLSEVHQSIGDLTNLLMINLMSYGLGCLQQQILLGACQLLKSP 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02216 690 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 150 IPR035897 -
Pumo7g02216 690 Gene3D - 176 331 IPR027417 -
Pumo7g02216 690 Pfam NB-ARC domain 234 419 IPR002182 GO:0043531
Pumo7g02216 690 SUPERFAMILY L domain-like 477 684 - -
Pumo7g02216 690 ProSiteProfiles TIR domain profile. 11 173 IPR000157 GO:0007165
Pumo7g02216 690 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 175 - -
Pumo7g02216 690 Gene3D - 10 175 IPR035897 -
Pumo7g02216 690 SMART till_3 12 147 IPR000157 GO:0007165
Pumo7g02216 690 Pfam TIR domain 13 177 IPR000157 GO:0007165
Pumo7g02216 690 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 669 IPR044974 GO:0006952
Pumo7g02216 690 Gene3D - 336 421 IPR042197 -
Pumo7g02216 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 430 IPR027417 -
Pumo7g02216 690 PRINTS Disease resistance protein signature 208 223 - -
Pumo7g02216 690 PRINTS Disease resistance protein signature 274 288 - -
Pumo7g02216 690 PRINTS Disease resistance protein signature 371 385 - -
Pumo7g02216 690 PRINTS Disease resistance protein signature 610 626 - -
Pumo7g02216 690 Gene3D Ribonuclease Inhibitor 458 689 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02216 Pumo-Chr7 62426690 62429516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02216 185 676 WRKY Transcription Factor Family AT5G45050 30.524 3.74e-55 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02216 - - gmx:100809413 810.446