Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02211 ATGGAATTCGCGTCTTCTTCATCATCTTTACCACATCCAAATCCTCATTCCTTTTCAAATCTGAATCCCCAATGGATATACGATGTGTTCATCAATTTTAGGGGAGATGACACCCGTAGGATGTTCGTTTCTCATCTCTATCATGCCCTTTCAACAAATGCTGGAGTCAACACTTTCTTTGATGAGGAGAATCTAGGCAAGGGAATGAAGCTGGAAGAACTAATGCAAGCAATAGAAGGGTCCCAGATGGCAATAGTTGTTTTCTCCAAAAGCTATATTGAGTCTACTTGGTGTCTTGATGAGCTTGCAAAAATCATTGAATGCCACGAAACTTACGGCCAAAGAGTTGTGCCCGTATTTTACGAAATTGACCCATCCGATGTACGTCATCAGAAGGGAGATTTTGGAGAAGCGTTGAAAGCAGCAGCACAAAAAAAATTTTCAGGAGAAGAACTGGAATCTGCGTTGTCGAGGTGGAGGCACGCACTCACCGAAGCTGCAAATTTCTCCGGTTGGGATGTGAGGAATTACAGGAACGAAGCTGAACTAGTGGACAAAATTGTTAAGGACGTTCTTAATAATCTGGAATACGAAGTCTTGTCAAATACCCGTTTTCCTGTTGGATTAGAACCCCGTGTAGAAAAAGTGATTCGATTAATTGGAAATGAATCCACAGAAGTCTGTATCATAGGGATATGGGGGATGGGAGGATCGGGTAAAACTACAATTGCCAAAGCCGTCTACAATCGAATTCATCGTAGGTTCATCGGTAGAAGTTTCATTGAAGATATTAGAGAATTTTGTCAAACAAGTCAAAAAGGGCTTGTCAGTTTACAAAAAACACTTATTTCAGATGTCCTAAAAAGAAAGATGAAGATAAAGAGCATTGGGAGGGGAAAAACTATGATTGAGAACAGACTTGCCAAAAAAAGGGCACTCATTGTACTTGATGATGTGAATGAGGTTGACCAGTTAGAAGCCCTGTGTGGTAATCGTAAATGGTTTGGTCAAGGAAGTGTAATAATCATTACAACTAGACACCTAAACCTGCTTGACCGGCTTAAAGTTGATCATGTTTATGAGATGGAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTTAGTTTGCATGCTTTTGAAGAAGCAAAACCAAGAGAAGACTTCAATGAACTTGCAAGAAATGCAGTTGCTTATTGTGGAGGACTACCACTAGCTCTTGAAGTCCTTGGTTCTTATTTAAGAGAGAGGAAAGCAAACGTGTGGAGCAGTGTGTTGTCAAAACTAAAAATAATTCCCAATGCTAAAGTTCAAAAGATATTAAAAATAAGCTTTGATGGTTTAAGTGATCAAATGGAAAAGGATATATTTCTTGATGTATGTTGTGTCTTTATTGGTAAAGACAGAGGCTATGTCACGGAGATACTAAATGGTTGTGGACTACATGCTGATGTTGGAATAACAGTTCTCACAGAATGTAGCCTCATACAAGTTGAAAAGAACAACAAACTCAGAATGCATCATTTGCTCCGAGACATGGGAAGAGAAGTTATTCGTGAAAGTTCAACAATGGAACCTGGGAAGCGCAGTCGATTGTGGTTTCAAGAGGATGTACTTGATGTATTGAGAACGAATACTGGGACAGAAGCTATTGAGGGATTGGCTCTGAAATTGAATTTAACCAACATGGATTTTAAAGCTGACGCTTTTATGGAAATGAGGAGTTTGAGACTGTTGCGACTTGATCATGTACAACTCACTGGAGATTATGGGTATCTTTCTAAGCAACTGAGATGGATCAGTTGGCAAGGGTTTCCTTCAGAATACATACCTAACAACTTTAATCTGGAAGGTGTAATTGCGGTTGATTTAAAACGCAGTAATCTTAGACTAGTCTGGAAAGAACCCCAGGTTTTGTGGTGTCTAAAAATCCTCAATCTTAGTCATTCCAAGTACTTGACAGAAACCCCTGACTTTTCAAAACTACCAAATCTTGAAAAGCTCATTCTCAAACATTGTCCAAGTTTGTACCAGGTACACCAGTCTATCGGAGATCTCTGCAAGCTTTTATTGATAAATTTGAAAGGCTGTACAAACCTAAGGAATCTCCCAAGAGAGACATATAAGTTGAAATCTTTGAAAACTCTCATCCTATCTGGTTGTTCAAAGATTGAGAAATTGGAAGAAGATATAGTGCAGATGGAATCCTTGACGACTCTAATTGCTGAAAATACTGCTGTGAAACAAGTTCCCTTTTCTATAAATAGAGACTTGGTTGATTTAGCACCAATCCTCAGCAGCCTTTTAAATCTTCGAAGTGTTTTGGTGCAATGTGATGCGGAGTTTCAAATATCTGAACAAGTAAGAACAATTCTGGATGAAGTACAAGGTGCAAATTCGGCTGAATTAGAAATAACATCATATACATCAGAAATTTCAAAGCATTCCTTGGAGTCTTATTTGATTGGAATTGGTAGTTGCCGAGAAGTCTTCAATACTCTCAGCAAGAGTATATCTGAGGGATTGGCAGCCAGTGAGTCTTGCGATGTTTGTTTCCCAGGAGACCACTATCCTTATTGGTTTGCCCATACTGGTGATGAGAGACATTCAGTGTATTTCACTGTGCGTGAGGATTGTCGCCTGAAGGGAATGACTTTGTGTGTTGTTTATTTATCAACACCTGAAACCACGGCAACTGAATGTCTTATTAGTGTCTTAATGGTTAATTACACAAAGCGCATCATCCAGATATACAAGCGAGACACAGTAATTTCCTTTAATGATGAAGATTGGCAGGTCATAATTTCACATTTGGGACCTGGAGACAAGGTGGGGATTTTTGTGACTTTTAGGCATGGATTGGTGGTCAAGAAGACAGCTGTCTATCTCATGTATGATGAGTCATTTGACATGGAAATCGAGCCTATTAAACCACCCATCAAAAAGGTTTACAGTAGGAAGAGGAAGAATGACGGAACATTCGAGTCACAAGGATTTATTAATAGCAGTAACTGTTTAGTGGACAAATAA 3027 0.3921 MEFASSSSSLPHPNPHSFSNLNPQWIYDVFINFRGDDTRRMFVSHLYHALSTNAGVNTFFDEENLGKGMKLEELMQAIEGSQMAIVVFSKSYIESTWCLDELAKIIECHETYGQRVVPVFYEIDPSDVRHQKGDFGEALKAAAQKKFSGEELESALSRWRHALTEAANFSGWDVRNYRNEAELVDKIVKDVLNNLEYEVLSNTRFPVGLEPRVEKVIRLIGNESTEVCIIGIWGMGGSGKTTIAKAVYNRIHRRFIGRSFIEDIREFCQTSQKGLVSLQKTLISDVLKRKMKIKSIGRGKTMIENRLAKKRALIVLDDVNEVDQLEALCGNRKWFGQGSVIIITTRHLNLLDRLKVDHVYEMEEMDENESLELFSLHAFEEAKPREDFNELARNAVAYCGGLPLALEVLGSYLRERKANVWSSVLSKLKIIPNAKVQKILKISFDGLSDQMEKDIFLDVCCVFIGKDRGYVTEILNGCGLHADVGITVLTECSLIQVEKNNKLRMHHLLRDMGREVIRESSTMEPGKRSRLWFQEDVLDVLRTNTGTEAIEGLALKLNLTNMDFKADAFMEMRSLRLLRLDHVQLTGDYGYLSKQLRWISWQGFPSEYIPNNFNLEGVIAVDLKRSNLRLVWKEPQVLWCLKILNLSHSKYLTETPDFSKLPNLEKLILKHCPSLYQVHQSIGDLCKLLLINLKGCTNLRNLPRETYKLKSLKTLILSGCSKIEKLEEDIVQMESLTTLIAENTAVKQVPFSINRDLVDLAPILSSLLNLRSVLVQCDAEFQISEQVRTILDEVQGANSAELEITSYTSEISKHSLESYLIGIGSCREVFNTLSKSISEGLAASESCDVCFPGDHYPYWFAHTGDERHSVYFTVREDCRLKGMTLCVVYLSTPETTATECLISVLMVNYTKRIIQIYKRDTVISFNDEDWQVIISHLGPGDKVGIFVTFRHGLVVKKTAVYLMYDESFDMEIEPIKPPIKKVYSRKRKNDGTFESQGFINSSNCLVDK 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02211 1008 Gene3D - 198 360 IPR027417 -
Pumo7g02211 1008 Pfam NB-ARC domain 212 439 IPR002182 GO:0043531
Pumo7g02211 1008 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 197 - -
Pumo7g02211 1008 PRINTS Disease resistance protein signature 306 320 - -
Pumo7g02211 1008 PRINTS Disease resistance protein signature 707 723 - -
Pumo7g02211 1008 PRINTS Disease resistance protein signature 229 244 - -
Pumo7g02211 1008 PRINTS Disease resistance protein signature 399 413 - -
Pumo7g02211 1008 SUPERFAMILY "Winged helix" DNA-binding domain 435 541 IPR036390 -
Pumo7g02211 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 754 IPR044974 GO:0006952
Pumo7g02211 1008 Gene3D Ribonuclease Inhibitor 553 756 IPR032675 -
Pumo7g02211 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 458 IPR027417 -
Pumo7g02211 1008 Gene3D - 21 197 IPR035897 -
Pumo7g02211 1008 ProSiteProfiles TIR domain profile. 25 195 IPR000157 GO:0007165
Pumo7g02211 1008 SUPERFAMILY L domain-like 566 754 - -
Pumo7g02211 1008 Pfam TIR domain 27 201 IPR000157 GO:0007165
Pumo7g02211 1008 Gene3D - 364 448 IPR042197 -
Pumo7g02211 1008 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 172 IPR035897 -
Pumo7g02211 1008 SMART till_3 26 169 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02211 Pumo-Chr7 62117005 62120998 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02211 27 753 WRKY Transcription Factor Family AT4G12020 31.191 2.18e-90 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02211 - - gmx:100815297 1307.35