Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02210 ATGGAATTCGCGTCTTCTTCACCATCCTTCTTGAAATCCAAACCCCAATGGAGATACGATGTGCTCATCAATTTCCGGGGAGAAGACACTAGTAGGAATTTCGTTTCTGATCTCCATTCTGCCCTCTCAAATGCTGGAGTCAACACTATCCTTGACGAGCAGAATCTACCCAAGGGAAGGATGCTGGGAGAACTAATGACAGCAATAGAAGGGTCTCAGATAGCAATAGTTGTTTTCACCAAAACCTATACTGGATCTACTAGGTGTCTTGACGAGCTTGCAAAAATCATTGAAATCCACAAAACTTTTGGCCAAAGAGTTGAGCCCGTATTTTACGAAATTGACCCATCCGATGTACGTCATCAGACGGGAGATTTTGGAAAAGCGTTGAAAGCAGCTGCACAAAAAAGATTTTCAGGAGAAGAACTGGAATCTGCGTTGTCGAAGTGGAGCCACGCACTCACCCAAGCTGCAAATTTCTCCGGTTGGGATGTGAGGAAATACAGGAGTGAAGCTGAACTGGTGGACGAAATTGTTAGGTACGTTCTTAATAATCTGGAATACCAAGTCTTGCCTATTACTAAATTTCCTGTTGGATTAAAATCCCACGTGGAAGAAGTGATTGGATTTATTGAAAAACAATCCACCAAAGTCTGTATCATTGGGATATGGGGAATGGGAGGATCAGGTAAAACTACCACAGCGAAAGCCGTCTACAGTCGAATTCATCGTAGGTTCATGGGTAGAAGTTTCATTGAAAATATTAGACAAATTTGTCAAAAAGATAGAAGAGGGCATGTTCGTTTACAAGAACAACTTCTTTTAGATGTCCTAAAAACAAAGGTCAAGATACAAAGTGTTGGAAAGGGAACAGCTATGATCAAAAGACTTTGTGGAAAAAGGTTGCTCATTGTACTTGATGATGTGAATGAGTTTGACCAATTAAAAGACCTATGTGGAAATCATCAATGGTTTGGTCAAGGAACTGTTATAATCATTACAACTAGAGATCTACAGCTACTGGAACTACTTAAAGTTGATCATGTTCATCAAATGAAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTTAGTTTGCATGCTTTTGGAGAAGCAAAACCAAGAGAAGACTTCAATCAACTTTCAAGAAATGTAGTTACTTATTGTGGAGGACTACCACTAGCTCTTGAAGTCCTTGGTTCTTATTTATTTGAGAAGACAAAGGAAGTGTGGGAAAGTGAATTGGCAAAACTAGAAATAACTCCCAATAATCAAGTTCAAGAGACATTAAGAATAAGCTTTGATGATTTACATGATCAGATGGAAAAGGATATATTTCTTGATATATGTTGTTTCTTTATTGGTAAAAACAGAGCCTATGTTACAGAGATACTAAATGGTGTTGGACTACATGCTGATATTGGAATAACAATTCTCATAGAGTGTCCTAAAAGTTGA 1458 0.3861 MEFASSSPSFLKSKPQWRYDVLINFRGEDTSRNFVSDLHSALSNAGVNTILDEQNLPKGRMLGELMTAIEGSQIAIVVFTKTYTGSTRCLDELAKIIEIHKTFGQRVEPVFYEIDPSDVRHQTGDFGKALKAAAQKRFSGEELESALSKWSHALTQAANFSGWDVRKYRSEAELVDEIVRYVLNNLEYQVLPITKFPVGLKSHVEEVIGFIEKQSTKVCIIGIWGMGGSGKTTTAKAVYSRIHRRFMGRSFIENIRQICQKDRRGHVRLQEQLLLDVLKTKVKIQSVGKGTAMIKRLCGKRLLIVLDDVNEFDQLKDLCGNHQWFGQGTVIIITTRDLQLLELLKVDHVHQMKEMDENESLELFSLHAFGEAKPREDFNQLSRNVVTYCGGLPLALEVLGSYLFEKTKEVWESELAKLEITPNNQVQETLRISFDDLHDQMEKDIFLDICCFFIGKNRAYVTEILNGVGLHADIGITILIECPKS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02210 485 Gene3D - 354 438 IPR042197 -
Pumo7g02210 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 449 IPR027417 -
Pumo7g02210 485 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 481 IPR044974 GO:0006952
Pumo7g02210 485 Pfam TIR domain 19 187 IPR000157 GO:0007165
Pumo7g02210 485 Pfam NB-ARC domain 201 428 IPR002182 GO:0043531
Pumo7g02210 485 ProSiteProfiles TIR domain profile. 17 186 IPR000157 GO:0007165
Pumo7g02210 485 Gene3D - 185 350 IPR027417 -
Pumo7g02210 485 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 188 - -
Pumo7g02210 485 SMART till_3 18 160 IPR000157 GO:0007165
Pumo7g02210 485 Gene3D - 12 184 IPR035897 -
Pumo7g02210 485 FunFam Disease resistance protein (TIR-NBS-LRR class) 356 438 - -
Pumo7g02210 485 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 163 IPR035897 -
Pumo7g02210 485 PRINTS Disease resistance protein signature 389 403 - -
Pumo7g02210 485 PRINTS Disease resistance protein signature 296 310 - -
Pumo7g02210 485 PRINTS Disease resistance protein signature 220 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02210 Pumo-Chr7 62110897 62112453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02210 198 481 WRKY Transcription Factor Family AT5G45050 36.014 7.57e-46 170