Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02207 ATGGATTATTTCAAGTCTTCTTCATCATCCAAACCCAAATGGATAAACGATATGTTCATCAATTTCAGGGGTGAAGACACCCGTAGGAGTTTCGTTTCTCATCTCGTTTATGCCCTCAAAAATGCCGGAGTCAAAACTTACTTTGACGAGGAAAATCTACACAAGGGAATGCAACTCAGGGAACTATTGCGAGAAATAGAAAGGTCTCGCATATGTATTGTTATTTTCTCCAGAAACTATACTGAATCTATTTGGTGTCTTGACGAGTTGGAAAAAATCATTCGATGCCACAAATTTTCTGGCCAGATAGTTGTGCCCATATTTTACGATGTTGAACCATCCGATGTACGTCATCAGAAGGGTGCTTTTGGAAAACACTTGAAAACACTTGCAGAAATAAGATATTCTGGACTATATCCAGAATATGGGTTGCCAGCGGGGAACAGGTCACGGGCACTCCGCGGTCTCGACAATCATAGGAATGAAGCTGCATCAGTGGAGAAAATTGTTTGGAGGTGGAGCAGCACACTCAAGACAGCTGCAGATTTCGCTGGTTGGAATGTGAGGAATCATAGGAATGAGGCACAACTAGTGAAGGAAATTGTTGAGGACGTTCTAAGAAAACTAGATAAGGCTCTCCTATCTACTACTGAATTTCCTGTTGGATTAGAATCCAAGGTGCAAAAAGTGATTGGAGTTATTGAAAATCAGTGCAGCAAAGTTTGTATCATAGGGATATGGGGAATGGGAGGATTGGGAAAAACTACCACAGCCAAAGCCATTTACAATCAAATTCATCATAGATTCACTAATAGAAGTTTCATTGAAGATATTCGAGAAGTTTGTGAAACAGATCGTAGAGGGCTTGTTCATTTGCAAGAACAACTTCTTTCAGATGTCCTTAAAACAAAGGTGAACATATATAGCATTGGGATGGGAACAACTATGATCCAGAACAAACTTTCTGGAAGAAAGGCACTCATTCTACTTGATGATGTGAATGAGTTTCGCCAATTAAAACACCTATGTGGAAATCGTCAATGGTTTCGTCAAGGAACTGTAATAATCATTACCACTAGAGATCTACGTCTACTGAACCAACTTGAAGTTGATTATGTTTATAAAATGGAGGAAATGGATGAAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCCTTTGGAGAAGCAAAACCAAGAGAAGACTTCAACGAACTTTCAAGAAATGTAGTTGCTTATTGTGGAGGACTACCACTAGCTCTTCAAGTCCTTGGTTCTTATTTGATTGACAGGACAAAGAAAGAGTGGGAAAGTGTATTGTTGCAACTAGAAATAATTCCCGATGATCAAGTTCAAGATAAATTAAGAATAAGCTTTGATGGTTTATGCAATCATATGCAAAAGGATATATTTCTTGATGTGTGTTGTTTCTTTATTGGTAAAGACAGAGCCTATGTTACGGAGATACTAAATGGCTACGGACTATGTGCAGATATTGGAATAACAGTTCTCATAGAGCGTAGCCTCATAAAAATTGAAAGGAACAACAAACTTGGAATGCATCCTTTGCTACGAGACATGGGAAGAGAGATAATTTGCAAAAGTTCAAGAAACGAACCTGGAAAGCGCAGTCGATTGTGGTTTCAAAAGGATGTACTAGATGTTTTGGCAACAAATACTGGGACAGAAGCGATTGAGGGACTGGCTCTGAACTTGGATTTCACCAGCAGAGATTGCTTTGAAGCTTGTGCTTTTGAGGAAATGAAGAGATTGAGACTGTTGCAACTAGATCATGTACAACTCACTGGAAACTATGGGTGTCTTTCAAAGAATCTGAGATGGATCTGTTGGCAAGGGTTTCCTTCAAAATACATACCTAACAACTTTTATCTGAAAGGTGTAATTGCAATGGATTTAAAATACAGTAATCTTAGACTAGTCTGGAAAGAACCCCAGTCGCTGTTGTGGCTGAAATTCCTCAATCTTAGTCATTCCAAGTACTTGACAGAAACCCCTGACTTTTCAACACTACCAAGTCTTGAAAAGCTCATTCTCAATGACTGTCCAAGTTTGTGCAAGGTACACCAATCCATTGGAGAACTCCACAATCTTGTTTTGATAAATTTGAAGGACTGTACAAGCCTAAGCAATCTCCCAAGAGAGACATATAAGTTGAAATCTGTGAAAACTCTCATCTTATCTGGTTGTTCGAAGATTGACATATTGGAAGAAGATATAGTGCAGATGGAATCCTTGACAACTCTAATTGCTGAAAATACTGCTGTGAAACAAGTTCCCTTTTCTATAGTAAGATCAAAGAGCATTGGATATATATCCCTATGTGGATATGAAGGACTGTCACGTAATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAATCTTCTATCTAGTCATATTAATTTGTTTTCTGGTCCTTCATCATCTCTAGTTTCCATGGATATGCAGAATAATGATTTGGGTGACCAGGCACCAATGCTTAGCAACCTCTCAAACGTTCGAAGTGTTTTGATGCAATGTGACACGGTGTTTCAACTATCTAAATTTGTGGGTGATTTATATGGTGTAAATTTTACTGAATTAGAAACAACATCATATACATCACAAATTTCAAAGCAGTCCTTGAGGTCTTATTTGATTGGAATTGGAAGTTTCCAAGAAGTTTTCAATACTCTCAGCAAGAGCATATCTGAGGGATTGGCAACCAGTGAGCCTTGCGATGTTGTTCTCCCAGGTGACAATTATCCTTATTGGTTGGCCCATATGGGTGAGGGACGTTCAGTGTATTTCACTGTGCCCGAGGATTGTCGCATAAAGGGAATGACCTTGTGTGTTGCATATTTATCAGACCCTGAAAACACTGCAACCGAATGTCTTACAAGTGTCTTGATTGTTAATTACCCAAAGTGCACCATCCAGATATACAAGCGAGACACAGTAATTTCCTTTAATGATGAAGATTGGCAGGGCATAATATCATATTTGGGAGCTGGAGATGGGGTGGAGATTTTTGTGACCTTTGAGCATGGATTGGTTGTTAAGAAGACAGCTGTCTATCTAATAACTGATGAATCCATTGACATGGAAATGGAGCCTTCTCCTGAGCCAAAGAAAAATGCCTTCATAAGATTGGTGAAGAAAAATCTAATTGTGGCATTTGGGCTTTTCCTTTTCCTTTCTTTTCGCTCCCTCACAAGAAAAAGGAGTTCTCCCTCTCATTCCTAG 3252 0.3902 MDYFKSSSSSKPKWINDMFINFRGEDTRRSFVSHLVYALKNAGVKTYFDEENLHKGMQLRELLREIERSRICIVIFSRNYTESIWCLDELEKIIRCHKFSGQIVVPIFYDVEPSDVRHQKGAFGKHLKTLAEIRYSGLYPEYGLPAGNRSRALRGLDNHRNEAASVEKIVWRWSSTLKTAADFAGWNVRNHRNEAQLVKEIVEDVLRKLDKALLSTTEFPVGLESKVQKVIGVIENQCSKVCIIGIWGMGGLGKTTTAKAIYNQIHHRFTNRSFIEDIREVCETDRRGLVHLQEQLLSDVLKTKVNIYSIGMGTTMIQNKLSGRKALILLDDVNEFRQLKHLCGNRQWFRQGTVIIITTRDLRLLNQLEVDYVYKMEEMDENESLELFSWHAFGEAKPREDFNELSRNVVAYCGGLPLALQVLGSYLIDRTKKEWESVLLQLEIIPDDQVQDKLRISFDGLCNHMQKDIFLDVCCFFIGKDRAYVTEILNGYGLCADIGITVLIERSLIKIERNNKLGMHPLLRDMGREIICKSSRNEPGKRSRLWFQKDVLDVLATNTGTEAIEGLALNLDFTSRDCFEACAFEEMKRLRLLQLDHVQLTGNYGCLSKNLRWICWQGFPSKYIPNNFYLKGVIAMDLKYSNLRLVWKEPQSLLWLKFLNLSHSKYLTETPDFSTLPSLEKLILNDCPSLCKVHQSIGELHNLVLINLKDCTSLSNLPRETYKLKSVKTLILSGCSKIDILEEDIVQMESLTTLIAENTAVKQVPFSIVRSKSIGYISLCGYEGLSRNVFPSIIWSWMSPTMNLLSSHINLFSGPSSSLVSMDMQNNDLGDQAPMLSNLSNVRSVLMQCDTVFQLSKFVGDLYGVNFTELETTSYTSQISKQSLRSYLIGIGSFQEVFNTLSKSISEGLATSEPCDVVLPGDNYPYWLAHMGEGRSVYFTVPEDCRIKGMTLCVAYLSDPENTATECLTSVLIVNYPKCTIQIYKRDTVISFNDEDWQGIISYLGAGDGVEIFVTFEHGLVVKKTAVYLITDESIDMEMEPSPEPKKNAFIRLVKKNLIVAFGLFLFLSFRSLTRKRSSPSHS 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02207 1083 ProSiteProfiles TIR domain profile. 14 209 IPR000157 GO:0007165
Pumo7g02207 1083 Gene3D - 212 374 IPR027417 -
Pumo7g02207 1083 Gene3D - 10 211 IPR035897 -
Pumo7g02207 1083 SUPERFAMILY L domain-like 569 851 - -
Pumo7g02207 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 472 IPR027417 -
Pumo7g02207 1083 Pfam TIR domain 17 132 IPR000157 GO:0007165
Pumo7g02207 1083 Gene3D - 378 462 IPR042197 -
Pumo7g02207 1083 PRINTS Disease resistance protein signature 722 738 - -
Pumo7g02207 1083 PRINTS Disease resistance protein signature 243 258 - -
Pumo7g02207 1083 PRINTS Disease resistance protein signature 413 427 - -
Pumo7g02207 1083 PRINTS Disease resistance protein signature 320 334 - -
Pumo7g02207 1083 SUPERFAMILY "Winged helix" DNA-binding domain 449 555 IPR036390 -
Pumo7g02207 1083 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 135 IPR035897 -
Pumo7g02207 1083 Gene3D Ribonuclease Inhibitor 581 888 IPR032675 -
Pumo7g02207 1083 Pfam NB-ARC domain 224 443 IPR002182 GO:0043531
Pumo7g02207 1083 SMART till_3 15 159 IPR000157 GO:0007165
Pumo7g02207 1083 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 759 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02207 Pumo-Chr7 61906723 61911856 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02207 17 768 WRKY Transcription Factor Family AT4G12020 27.985 4.42e-71 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02207 - - gmx:100806743 1520.75