Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02197 ATGCTTCAGAAGGCCATTGTGAGGAACCCTTCATTGCTGCTATCCGAGGGTTATAATGTTAAGGCAACGGTTGAGCTCTATGAGAATATGGGCGTTAAGAAAGGGGACTTGATTCAGATGCTCCTTTTGCGGCCCACGGTTATTTCGAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGCAAGACCAGGCTTACCAAGGATTCGAAGATGTATAAATACGTGGTGACATTAATAGGAATATCTCGTGTCGAAACAATTCGGGATAAGGTGGCAAATTTCACAAAGTTTGGATTTTCCGAAGAGGAGATATTTGGTCTTGTGGGGAGGTCTCCTAATGTATTGACATTGTCAACCAATAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCAGCCGTATTTCTTGTATGCCAATGTGGATACTGTTTTGAAGCCAAGAGTGCTTCTAGCATTGAAGATGCAAGATATGGATTCGAAGTTGCAAATCATAGGACCAACGATCCTAAGTTCACTGAGGATGACAGAGCAGAGATTTTAA 576 0.4201 MLQKAIVRNPSLLLSEGYNVKATVELYENMGVKKGDLIQMLLLRPTVISRTSFDAEKLEYLSKTRLTKDSKMYKYVVTLIGISRVETIRDKVANFTKFGFSEEEIFGLVGRSPNVLTLSTNKVQRNMTFILGTMKLDAKMVLKQPYFLYANVDTVLKPRVLLALKMQDMDSKLQIIGPTILSSLRMTEQRF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02197 191 PANTHER CGI-12 PROTEIN-RELATED 3 191 IPR003690 GO:0003690|GO:0006355
Pumo7g02197 191 Gene3D Transcription termination factor 3, mitochondrial 1 191 IPR038538 -
Pumo7g02197 191 Pfam mTERF 5 191 IPR003690 GO:0003690|GO:0006355
Pumo7g02197 191 FunFam Mitochondrial transcription termination factor family protein 1 191 - -
Pumo7g02197 191 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Pumo7g02197 191 SMART mt_12 138 170 IPR003690 GO:0003690|GO:0006355
Pumo7g02197 191 SMART mt_12 70 101 IPR003690 GO:0003690|GO:0006355
Pumo7g02197 191 SMART mt_12 3 33 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02197 Pumo-Chr7 60854741 60855316 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo7g02197 mTERF 2.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02197 K15032 - gmx:100799629 329.331