Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02184 ATGGAGATAAAACCAGAACTAGTGCGAGCCATAGAAGGGTCTCGGATATCCATCGTCGTTTTCTCCGAAAACTATGCTTCATCTACGTGGTGTCTTGATGAGCTGGTTAAAATCATAAAATGCCGTAAAACTTATGGCCAGGTGGTTATCCCTGTATTTTATGATGTTGATCCATCAGTTGTTCGTAAACAAAAGGGTGCTTTTGGAGAGCATTTGGAAGCACTTGAAGCGACGCCCGATAAGTTAAGGATTTGGCGGAGTGCACTCACGGAGGCTGCAAATACTTCTGGTTGGGATTCAACGACATTCAGGCGGCAAAGGTTGTGTTTTAGGGATCTTGGGGATGGGGGATTGGGTAAAACAACCATCGCCAAAGTCATCTACAATCAGATTCGTCGGAGATTCAAGCATAGATGTTTCATTGAAAATATTAGAGAAGTTGGTGTAAATAATGGTAATGAGTGTATTGATTTGCAAGAAAAACTTCTTTCTGGTCTCGGAATTGATACAAGGGAGAAGATACATAACAGTGCGATGGGAACAGCTATGATCGAGAAAAGCCTTGTTGGAAAAAGGGCTCTCATTGTACTTGATGATGTGACCGACTTTCAGCAATTAAAAACCCTATGTGGAAATATTGAAAGCATTCTTCAAGCAAGTGTAATCATCATCACAACCCGAGATGAACGCCTGCTTAATGTCCTTAAAGCTAAAAATCATAAGGTCCATATCTGTAGAATAAAGGAATTGGACCAAAATGAGTCCCTTGAGCTTTTCAGGTGGCATGCTTTTAGAGAAGAAACTGCAACAGAAGACTTGATTAAACTCTCAACGGACATAGTTGCTTACTGTGGAGGACTACCACTGGCTCTTGAAGTCATTGGATCTTTCTTATTACCTGAGAGGAGGAAAGAACAATGGGAAAGTGTATTGTCAAAACTGAAGAAAATTCCCAATGAAAAAGTGCAAGAGAAACTGAAAATAAGTTATGATGGCTTAGATTGTGACGAAAAGGATATATTCCTTGACGTATGTTTTTTCTTTATTGGCAAAAACAGAGCAGATGTTACAGAGATATTAAAAAGCTGTGACCTTCATCCTGAGATTGGAATAACAACCCTGGTTGAAAGGAGCCTCATAAAGCTAGAAAAGAATAACAAGCTCAACATGCATGATTTGCTACGTGACATGGGAAGAGAAATTGTTCGTCAAAGTTCTCAAAAGGAACCTGAGAATCGTAGTCGACTGTGGGTTCACCAAGAAGTACTTGATGTGTTGTCAGAAAAAACCGGATTGATAACCAATGATTCTAGTGGTTTTTCCCTTCCTGGTGACAATTATCCTTATTGGCTAGCTTATATAGGTCAGGGACACTCAGTTCATTTTCAATTGCCTGAGGATAGTGATTGTTGCATGAAGGGAATGGCTTTCTGCGTTGTTTATTCATCAACCTGTAAAAACATGGCAGCTGAATGTCTTACTGGTATCTTGATTGTTAATTACACAAAGTGCACCATCCAAATATACAAGCACGACACAATAACATCCTTCAATGATGAAGATTTGCAAGGCATAATATCAAATCTAAGACCTAGTGACAATGTGGAGATTTTTGTAGCTCTTGGGCATGGATTGACAGTTCTGAAGACAGCTATCTATCTAATATATGGTCAGTCAATTTCTGTTGAAATTGAGCAATCACCTAATATGAACATGCAACCATCAGAGTGGACAGACGAGAAGGATTGCATGCAGGAAGGCCAATCAAGCGGAGTAGGTCGATGCTAG 1788 0.3988 MEIKPELVRAIEGSRISIVVFSENYASSTWCLDELVKIIKCRKTYGQVVIPVFYDVDPSVVRKQKGAFGEHLEALEATPDKLRIWRSALTEAANTSGWDSTTFRRQRLCFRDLGDGGLGKTTIAKVIYNQIRRRFKHRCFIENIREVGVNNGNECIDLQEKLLSGLGIDTREKIHNSAMGTAMIEKSLVGKRALIVLDDVTDFQQLKTLCGNIESILQASVIIITTRDERLLNVLKAKNHKVHICRIKELDQNESLELFRWHAFREETATEDLIKLSTDIVAYCGGLPLALEVIGSFLLPERRKEQWESVLSKLKKIPNEKVQEKLKISYDGLDCDEKDIFLDVCFFFIGKNRADVTEILKSCDLHPEIGITTLVERSLIKLEKNNKLNMHDLLRDMGREIVRQSSQKEPENRSRLWVHQEVLDVLSEKTGLITNDSSGFSLPGDNYPYWLAYIGQGHSVHFQLPEDSDCCMKGMAFCVVYSSTCKNMAAECLTGILIVNYTKCTIQIYKHDTITSFNDEDLQGIISNLRPSDNVEIFVALGHGLTVLKTAIYLIYGQSISVEIEQSPNMNMQPSEWTDEKDCMQEGQSSGVGRC 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02184 595 Gene3D - 249 334 IPR042197 -
Pumo7g02184 595 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 472 IPR044974 GO:0006952
Pumo7g02184 595 SMART till_3 1 95 IPR000157 GO:0007165
Pumo7g02184 595 PRINTS Disease resistance protein signature 284 298 - -
Pumo7g02184 595 PRINTS Disease resistance protein signature 109 124 - -
Pumo7g02184 595 PRINTS Disease resistance protein signature 187 201 - -
Pumo7g02184 595 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 98 IPR035897 -
Pumo7g02184 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 343 IPR027417 -
Pumo7g02184 595 SUPERFAMILY "Winged helix" DNA-binding domain 321 426 IPR036390 -
Pumo7g02184 595 Gene3D - 1 114 IPR035897 -
Pumo7g02184 595 Pfam NB-ARC domain 114 327 IPR002182 GO:0043531
Pumo7g02184 595 Gene3D - 115 244 IPR027417 -
Pumo7g02184 595 MobiDBLite consensus disorder prediction 571 595 - -
Pumo7g02184 595 Pfam TIR domain 2 95 IPR000157 GO:0007165
Pumo7g02184 595 ProSiteProfiles TIR domain profile. 1 117 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02184 Pumo-Chr7 60269583 60276596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02184 109 417 WRKY Transcription Factor Family AT5G45050 32.907 1.91e-44 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02184 - - gmx:100809413 514.998