Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02180 ATGCTTCGGTTTCTCCCAACTGGGTCAAACATTTTCCAGTCTTTTCCACGCGCCGCAGTTATAACAGCCCTGCGAGCGTTCACTTCCGCCACCTGTTCGACCATTGGCCTCACCCAAACCAAGGTTGAAGTTGAAGATGACAAAAACAAATGGAGCGACGCTGCTGAACTTTTGAGCAAATGGGGTTGCAGTGACGATGATTTGGTGAGAATATTCTCGCGTTGCCCCTCATTGCGCAATGCTGATCCCACGCAGGTTCAGTCCAAACTGTGCCTGCTGAGTGATCTGGGCTTATGTGCATCTGAACTTGTGAAGATTGTCAATTGTAGGCCACGGTTTTTCCGGTCTCGGATTAACAGTTGCTTAGAAGAGAGGATGGCACATCTTGCATCGTTGTTTGAGACAAAAGAAATGCTTCAGAAGGCCATTGTGAGGAACCCTTCATTGTTGCTATCCGAGGGATATAATGTTAAGGCAACGGTTGAGCTCTATGAGAAGTTGGGCCTTAAGAAAGGGGACTTGATTCAGATGCTCCTTTTGCGGCCCACGGTTATTTCGAGGACTTCCTTTGATGCTGAAAAGCTGGAATATTTAAGCAAGACTGGGCTTACCAAGGATTCCAAGATGTATAAATACGTGGTGACATTAATAGGAATCTCTCGCGTTGAAACGATTCGGGATAAGGTGGCAAATTTCACGAAGTTTGGGATTTCCGAAGAGGAGATATTTGGTCTTGTGGGGAGGTCTCCGAATGTATTGACATTGTCGACCGATAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACGATGAAGCTTGATGCTAAGACGGTTCTAAAGCAGCCGTATCTCTTGTATGCAAATGTGGATACTGTTTTGAAGCCAAGAGTGCTTCTAGCATTGAAGATGCAAGATATGGATTCGAAGTTGCAAATCATGGGACCAACAATCCTAAGTTCACTGAGGATGACAGAGCAGAGGTTTTTAAACTTGTTTGTCAAATGCCATGACGAGGATGTTGCCAATGAATTGATGGAATTCTATAAACGGACCAAAGAGGTGAAGAGATTAGGAGAGTCATCAAAGAAGTACTGTAAGAGAGGATTCCCTTTCTGA 1116 0.448 MLRFLPTGSNIFQSFPRAAVITALRAFTSATCSTIGLTQTKVEVEDDKNKWSDAAELLSKWGCSDDDLVRIFSRCPSLRNADPTQVQSKLCLLSDLGLCASELVKIVNCRPRFFRSRINSCLEERMAHLASLFETKEMLQKAIVRNPSLLLSEGYNVKATVELYEKLGLKKGDLIQMLLLRPTVISRTSFDAEKLEYLSKTGLTKDSKMYKYVVTLIGISRVETIRDKVANFTKFGISEEEIFGLVGRSPNVLTLSTDKVQRNMTFILGTMKLDAKTVLKQPYLLYANVDTVLKPRVLLALKMQDMDSKLQIMGPTILSSLRMTEQRFLNLFVKCHDEDVANELMEFYKRTKEVKRLGESSKKYCKRGFPF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02180 371 Gene3D Transcription termination factor 3, mitochondrial 35 206 IPR038538 -
Pumo7g02180 371 PANTHER CGI-12 PROTEIN-RELATED 41 337 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 SMART mt_12 140 170 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 SMART mt_12 275 307 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 SMART mt_12 243 274 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 FunFam Mitochondrial transcription termination factor family protein 122 342 - -
Pumo7g02180 371 Pfam mTERF 56 150 IPR003690 GO:0003690|GO:0006355
Pumo7g02180 371 Pfam mTERF 111 329 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02180 Pumo-Chr7 59974867 59976071 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo7g02180 mTERF 2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02180 K15032 - gmx:100799629 657.136