Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02179 ATGGCGGGCATGGCAATTGATTTGGAGAAGTCAATTTTGGAGAAATTGATAAATGCAACAATAGAACAATCACGTTATATTTGTTGCTTCACATGCATTGCTGAGGACTTTGAAAAGGAAAAGGAAACTTTGAAAGCAAAAAGGATAAATGTGGGAGAATATGTTAAAGTGGCAAACAGAAGAGCCGAAAGCATACGAAAAGATGTCACATATTGGCAAGAGCAAGCAGATAAGCTTATTCAAGAGGACACCAAAACAAAAGTGACATGCTTTTCTGGGTGGTGTCCTAATTGCAAATGGCAATATAGTAGGGGAAAGAAACTGGCAAACAAGACTGAAGAGATTAAAAGACTCATCATGGAAAGTAACTTTGAAAGTGTTCGAATCCCTCCTGATGTTCCAGATGTTGAATATTATTCTTCTCAAAATTACATTGATTTCAAAAGTAGAGAGTTGAAATACAAAGAACTTTTGGGTGCATTGACAGATGATAACAACTATATGACTGGATTGCAAGGGATGGGGGGCACAGGTAAAACAACACTAGCGAAAGAAGTGGGTAAGGAGCTTAAGAAATCAAAAAAGTTTGATCAAGTCATTGATACTACAGTATCTTATACTCCTAATATCAAAAAGATTCAAGATGATATTGCAGGACCATTAGGATTATCATTAAAGGATTGTACTGAATCAGAGAGGCCCAAAAGGTTGTGGAGTAGATTGACCAATGGTAAGAAAATTCTTATAATTCTAGATGATGTGTGGGTAGATATCAACTTTGAAGAAATTGGTATTCCATTTAATGACAATCACAATGGTTGTAGAATTCTTGTAACCACCCGCGATCTAAGGATATGCAGCTTAATGGGGTGTGATAGGATAATTCATCTTGAGCTCTTACCTAAGGAGGATGCATGGATCTTGTTCAAAAAGCATGCTGGTTTATGTGATAGTTCCTCTATAAGTATTCTTGATAAGGGTCGTAAAATTGCCAAAGAATGCAAAGGATTACCAGTTACAATTGCAGCTATTGCTAGCAATTTAAAGGGCCAACAACGCCAAGAAGAATGGAGTGCAGCCTTAAAATCCTTGCAGAAGTCCACAACCCTACAGGGTGTTGATGAAAAATTGATTAAAATTTACCAATGTTTGAAGTATAGCTATGACAATATGAAAAATGAAAAAGCTAAGGGACTGTTCCTTTTATGCTCCATGTTCCCAGAAGATGAAAAAATTTCTATTGAACTTTTAACCAAAATTTCCATTGGAGCAGGCCTTGTTGGGGAAATTGATGATAATTATGATGCAAGTCGAAATGAAGTAGTTGCAGCCAAAAATAAACTTGTAGATTCATGTTTATTGTTGGATGGCAAATTTGAAAGTGTGAAAATGCATGACTTGGTTCGTGAAGTAGCCTTATGGATAGCTAACAAGGAGATTCAAGCAGTGAATACATCTAACAAAAATCAAAAGTCATTGGTTGAAAAGGCTAAGAATATTAAATATTTGTTGTGTGAAGGCAAGGGCATGGATGTGTTTTCCTTTAGGTTTGATGGATCTAAACTTGAGATTCTAATTGTCTACTTCAATAGAGATGGAAATGATTATGTGGAAGTACCAAATTCATTCTTTGAAAATGTGATGGGGCTTCGAGTTATATATTTATCAAATAAGACCTGGGGGAAGCCAACTCTATCACTACCACAGTCAATTCAGTCATTGAGCAATATGCGATCTTTATGCCTTAAAAGATTCAACTTAGGTGACATCTCTATTCTTGGAAACCTACAGAGGCTTGAGACTCTTGAATTGGTTCATTGTTTAATGGATGAATTGCCATGTGAGATTGCGAAATTGGAGAAACTTAAATTGTTGAACTTGGATTATTGTGAATTTAAAAGGAATAATCCTTTTGAAGTGATTGAAAGTTGCTCTTCATTGGAAGAATTGTATTTGATTTATAAATTTTCAGTTGATAGTTCAACAACGAACCAAAAAGTAAAGCTTCCTAAATTGCAAAGGTTTCGTATAGTGGATTTGTGGTCCTTATGTTTTTTATGCACAGATTGGTCAATAAGGAATTCCCTATGGGTTTTAAAGAGTGATGATTTTTTCTCTGAAGCGACATTCAAGCATCTAATGCAAACAACAGAGTTTCTTTATCTATTTGGACTTCAGGGAGGGTGGACAAATCTCATACCTGAGATTATTTTGCCTGATGATAAAGGTACACATTATTTAGTTGAGGTTACGTTGGACTACATTTCACAATTCCAGTGCCTTATTGACACTAAGCATATTGGTTCTCATGTACTAAATGTCTTCTCCAAGTTGGTTGTACTTAGACTTGAACGAATGGAAAATATGAAAGAAATATGCAGTGGTCCCCTTCCCTTCGAACTTCTAAAAAGTTTAGAGACGTTGTTTATAGAAGATTGTATACATTTACAAGGCATATTGTTTAAGAGCAAGCTATCTCTCAACAATCTTAAATGGTTGGTTATACAAAACTGCCCAATGTTGACGTCTTTGTTTCAACTATCGACCACACAAAGCCTAGTGCTATTGGAGCGTTTGGAGATAGAGGATTGTGAACAATTGAAAAGTATAATAATAGATGAAAGAAAAATGGAGGATTTTGGAGAAGAAATAGTTGATGGTGATAATGATAACAAGAGTGGTGGTTCAATGTTTCCAAATTTAACAACTCTTCATATCTTGCGGTGTCCCCAATTGGCTTTTATACTTCCGGTGGTTGCTGCTCGAGATGTTCCAAAATTGGAAGTTATGGACATATGTGACTGTGTTGAGCTAAAATACATATTTGGCTCATACCAACATAAGCATGAAGAGCAAGATTTGCATCAAGGGCAAAAGGATTTCATATTCGTTACACTAATAAAAGTGAATCTAAAAGCCTTGCCAAATTTTGTGGATATTTTTCCGGAATGTGAACAATCCATGTGTTCATCTATGAAGAGGTCATCTTCAAAAGATGGCTCCAAGGAACAAGTAGAATCAGATCCCATAAAATGTAATATTTTCCCTTGGACTCATAAACTTAGGCACAAATTGAGGACTACAAAAATCCCTTCAAATTCCAAGGATCAATTGCAAGATTGCTCTCTTTCATCGATATGTTTCCAACCCCACAACATGTATATAACAAACTTGAAGGTGTGA 3183 0.3572 MAGMAIDLEKSILEKLINATIEQSRYICCFTCIAEDFEKEKETLKAKRINVGEYVKVANRRAESIRKDVTYWQEQADKLIQEDTKTKVTCFSGWCPNCKWQYSRGKKLANKTEEIKRLIMESNFESVRIPPDVPDVEYYSSQNYIDFKSRELKYKELLGALTDDNNYMTGLQGMGGTGKTTLAKEVGKELKKSKKFDQVIDTTVSYTPNIKKIQDDIAGPLGLSLKDCTESERPKRLWSRLTNGKKILIILDDVWVDINFEEIGIPFNDNHNGCRILVTTRDLRICSLMGCDRIIHLELLPKEDAWILFKKHAGLCDSSSISILDKGRKIAKECKGLPVTIAAIASNLKGQQRQEEWSAALKSLQKSTTLQGVDEKLIKIYQCLKYSYDNMKNEKAKGLFLLCSMFPEDEKISIELLTKISIGAGLVGEIDDNYDASRNEVVAAKNKLVDSCLLLDGKFESVKMHDLVREVALWIANKEIQAVNTSNKNQKSLVEKAKNIKYLLCEGKGMDVFSFRFDGSKLEILIVYFNRDGNDYVEVPNSFFENVMGLRVIYLSNKTWGKPTLSLPQSIQSLSNMRSLCLKRFNLGDISILGNLQRLETLELVHCLMDELPCEIAKLEKLKLLNLDYCEFKRNNPFEVIESCSSLEELYLIYKFSVDSSTTNQKVKLPKLQRFRIVDLWSLCFLCTDWSIRNSLWVLKSDDFFSEATFKHLMQTTEFLYLFGLQGGWTNLIPEIILPDDKGTHYLVEVTLDYISQFQCLIDTKHIGSHVLNVFSKLVVLRLERMENMKEICSGPLPFELLKSLETLFIEDCIHLQGILFKSKLSLNNLKWLVIQNCPMLTSLFQLSTTQSLVLLERLEIEDCEQLKSIIIDERKMEDFGEEIVDGDNDNKSGGSMFPNLTTLHILRCPQLAFILPVVAARDVPKLEVMDICDCVELKYIFGSYQHKHEEQDLHQGQKDFIFVTLIKVNLKALPNFVDIFPECEQSMCSSMKRSSSKDGSKEQVESDPIKCNIFPWTHKLRHKLRTTKIPSNSKDQLQDCSLSSICFQPHNMYITNLKV 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02179 1060 Pfam NB-ARC domain 156 390 IPR002182 GO:0043531
Pumo7g02179 1060 Gene3D Ribonuclease Inhibitor 823 994 IPR032675 -
Pumo7g02179 1060 PRINTS Disease resistance protein signature 168 183 - -
Pumo7g02179 1060 PRINTS Disease resistance protein signature 241 255 - -
Pumo7g02179 1060 PRINTS Disease resistance protein signature 617 633 - -
Pumo7g02179 1060 PRINTS Disease resistance protein signature 334 348 - -
Pumo7g02179 1060 Gene3D Ribonuclease Inhibitor 460 701 IPR032675 -
Pumo7g02179 1060 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 974 - -
Pumo7g02179 1060 Gene3D - 132 295 IPR027417 -
Pumo7g02179 1060 SUPERFAMILY L domain-like 455 946 - -
Pumo7g02179 1060 FunFam Probable disease resistance protein At1g61300 133 293 - -
Pumo7g02179 1060 Gene3D - 300 392 IPR042197 -
Pumo7g02179 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02179 Pumo-Chr7 59940133 59944434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02179 169 580 WRKY Transcription Factor Family AT5G45050 23.944 6.89e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02179 - - var:108346730 1260.74