Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02169 ATGAACGACGGCGAGAGCCGCCAAAACGACAGCACACAGCCACTCGATTTGGAACACCTGAACATTATCTCCGCCGTGGGGCGAGGCGCCAAGGGCGTCGTGTTCCTCGCGAGGACCGGTGACCGGTCGTCGTCGAGTGAGTGCGTGGCGCTGAAAGTGATATCGAAGGCGCTGATCCATCAGAAGAAGGCGAAGCTAAACGACGCGGAGGAGTACGCGAGGTTGTCGTTTGAAGAGCAGGTGCTGCGTCGTTTCGATCACCCGCTTCTGCCGCGGCTGAGAGGGGTTTTCGAAACCGATAAAGTTGTTGGATTCGCCATCGATTACTGCCACGGTGGCACCCTCCATTCTCTTAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGACACAATCAGGTTTTACGCTGTGGAATTGGTCCTCGCATTGGAGTATTTGCACAATTTGGGAATAGTGTACAGAGATTTGAAGCCAGAGAACGTGATGATTCAAGAAAACGGTCACATAATGTTGGTTGATTTTGATCTCTCCAAAAAGCTAAACCCTAAATCCTCTCACTCACTGAGTCACAACTCGTCCCGGAGTCACTCGGAGAAAAAACTCGCGAGGAAGCAACGGTTAACGCGGTTCTACAGTTTCTGCAACTCGGGAATCTTGCCCTGCGACTCGGACTCGGAGCCCCCACTCAGCAGCGTCAACTCAGCGCGCCGCACCGAGTCCGACTCGGTCGAGAAATCAAACTCGTTCGTCGGAACAGAAGAGTACGTGGCACCCGAAATAGTTTCAGGAAAAGGTCACGGCTTCAGCGTTGACTGGTGGACATACGGCGTCGTTTTGTACGAGATGCTATACGGAACGACGCCGTTTAAGGGCGCGAATCGGAAGGAAACGTTTTACCGAATACTAACGAAGGAGCCGGAGTTAACGGGGGAGAAGACGGCGCTACGGGACTTGATTGCGAGATTGCTGGAGAAAGATCCTGACCGTCGGATTGACGTTGATGAAATCAAGGGCCACGATTTCTTCAAGGGGGTTAAGTGGGACACGGTGTTGCGCATTGCGAGGCCACCTTATATTCCAGAAAACGAGGTTGAGAACAAAGTGGGGTTCAGCAAAAGCGACGTTGAAGTTTTCGTGGACGAGGTGTTTTTTCCAACGGGTGGTGATGATGATGGAGGAGAGAAAACGAAAACGGTGTTAGAAAAAAAGGATAATAATGGGTAG 1224 0.5155 MNDGESRQNDSTQPLDLEHLNIISAVGRGAKGVVFLARTGDRSSSSECVALKVISKALIHQKKAKLNDAEEYARLSFEEQVLRRFDHPLLPRLRGVFETDKVVGFAIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHNLGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNPKSSHSLSHNSSRSHSEKKLARKQRLTRFYSFCNSGILPCDSDSEPPLSSVNSARRTESDSVEKSNSFVGTEEYVAPEIVSGKGHGFSVDWWTYGVVLYEMLYGTTPFKGANRKETFYRILTKEPELTGEKTALRDLIARLLEKDPDRRIDVDEIKGHDFFKGVKWDTVLRIARPPYIPENEVENKVGFSKSDVEVFVDEVFFPTGGDDDGGEKTKTVLEKKDNNG 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02169 407 MobiDBLite consensus disorder prediction 224 244 - -
Pumo7g02169 407 FunFam Serine/threonine-protein kinase OXI1 244 361 - -
Pumo7g02169 407 SMART serkin_6 20 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02169 407 MobiDBLite consensus disorder prediction 385 407 - -
Pumo7g02169 407 ProSiteProfiles Protein kinase domain profile. 20 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02169 407 SUPERFAMILY Protein kinase-like (PK-like) 18 365 IPR011009 -
Pumo7g02169 407 Pfam Protein kinase domain 22 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02169 407 Pfam Protein kinase domain 243 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02169 407 ProSiteProfiles AGC-kinase C-terminal domain profile. 343 407 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo7g02169 407 PANTHER FLIPPASE KINASE 1-RELATED 11 367 - -
Pumo7g02169 407 Gene3D Phosphorylase Kinase; domain 1 20 113 - -
Pumo7g02169 407 FunFam Serine/threonine-protein kinase OXI1 19 113 - -
Pumo7g02169 407 FunFam Serine/threonine-protein kinase OXI1 114 182 - -
Pumo7g02169 407 MobiDBLite consensus disorder prediction 388 407 - -
Pumo7g02169 407 Gene3D Transferase(Phosphotransferase) domain 1 114 185 - -
Pumo7g02169 407 Gene3D Transferase(Phosphotransferase) domain 1 233 361 - -
Pumo7g02169 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02169 Pumo-Chr7 59562713 59566052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02169 1 383 AGC Kinase Gene Family AT3G25250 59.536 1.77e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo7g02169 Pkinase 7.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02169 K20714 - gmx:100785773 650.973