Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02145 ATGGCTTCCCCTTTGCTTCTTTCCTTTCTCTTCTGCTCAGTGATTCTGTTACCCTTTTTTGTTGTAGCCCAAACCAAAACCAACATAGCCATAGGTGATTCTTACAATGCAGGAAAAAGCACAACCCCATGGTTGGTTTCATCACCTTCTGGTGACTTTGCCTTTGGTTTCCTCCCACTTGAGGACACCCCTGATCATTTCATACTTTGCATTTGGTATGCTAAGATTCAAGAGAAAACCATAGTTTGGTTTGCCAATAGGGACAAGCCTGCCCCAGAGGGCTCAAAAGTGGAGCTTTCAGCTGATGATGGGTTGGTGCTCACTGCCCCAAATGGTGAGCAGTTATGGAACACTGGGAGCATCACTGTCAGTGTTTCTAGTGGTGTGTTCAATGACACTGGCAACCTTGTGCTTCAGGATGGTGGCTCCAACAGTGTTTGGCAGAGTTTCAAGGACTATAGAGACACCTTGCTGCCTTCTCAGACTATGGAAAGGGGTCAAAAGCTTTCTTCTAAACTTAGGAGGAATGATTTCAACAGGGGCAGGTTTGAGCTCTTTTTCCAAAATGATGGTAATCTTGTGATGCACTCTATAAATTTGCCATCTGGGTATGTTAATGATAACTACTATGCAAGTGATACCATTGAGTCCAACACATCAAGTGCTGGGACTCAATTGGTGTTTGATAGGTCAGGAGATGTGTATATTTTGAGGGATAACAAAGAAAAGTACAATTTGTCAGATGGGGGTAGTGGAGTTTCTTATTCTACCACTCAGTTTTACCTTAGAGCAACTCTTGATTTTGATGGGGTGTTCACACTATATCAACATCCAAAGGGTTCTTTTGGTAGTGGAGGTTGGACCCCAGTGTGGTCTCATCCAGATAATATCTGTAAGGATTATCTTTCTGCTGCAAGTAGTGGTGTTTGTGGATATAATAGCATTTGCAGAATAGGAGATGATAAGAGGCCAAACTGTCAGTGCCCAAAATGGTACTCACTGGTTGATCCTACTGATCCCAATGGTAGCTGCAAACCGGATTTTGTACAATCATGTGTTGTAGATGAACTTGGTAAAAGAAAGGATCTATATGATTTTGAGGTGTTGATAGATACTGATTGGCCTCTTTCAGATTCTGTGCTCCAAAAACCCTTCACTGAAGAACAATGCAGACAATCTTGTATGGAAGATTGCATGTGTTCTGTTGCTATTTTCAGGCTAGGTGATAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGTAGAGTTGATGCCACACTTAATGGTGCAAAGGCCTTCATGAAAGTGAGGAAAGACAACTCCTCCTTGGTTGTTCCTCCAATCATTGTGAACAAGAATAATAGGAACACTTTGATTGTGGTTGGCTCAGTGCTTTTGGGTGGTTCTGCTTTTCTCAATCTCATATTGGTTGGAGCAATCTGCTTGAGCAGTTCCTATGTTTTTCGGTACAAGAAGAAGCTTAAAAGAGTTGGCAAAAGTGACACTAAAGTGGAAACCAATTTGCGTTGCTTCACTTATGAGGAACTTGAAGAAGCCACCAATGGCTTTGACAAAGTGCTAGGAAAGGGAGCTTTTGGTATTGTGTATGAAGGAGTCATCAACATGGGTTCCCTTACTCGCGTGGCGGTAAAAAGGTTGAACACTTTTCTCTTGGAAGAGGTTCAGAAGGAATTCAAGAATGAACTGAATAGCAGAACCAACACTGCCATAAGGGGAACAAAAGGGTATGTGGCACTTGAATGGTTCAAAAACATGCCAATCACGGCCAAAGTGGATGTCTATAGTTATGGGGTGCTGTTGCTTGAGATAGTTTCATGCAGAAAAAGTGTAGAATTTGAGGAAGATGAGGAGAAAGCAATCCTAACTGAATGGGCTCATGACTGCTACAAAGAAGGTGTTCTTCATAACTTGGTTGAGAATGACAAAGAGGCATTGGATGACATGAAGACCTTGGAGAAGTTGGTAATGATTGCCCTTTGGTGTGTGCAAGAGGATCCTGGTCTTAGACCAACAATGAGAAATGTGACACAGATGCTTGAAGGTGTTGTTGAAGTCCAAGTGCCACCATGCCTCTCCTCACAAATTAGTATTCAATATTCTCTAGACTAA 2130 0.423 MASPLLLSFLFCSVILLPFFVVAQTKTNIAIGDSYNAGKSTTPWLVSSPSGDFAFGFLPLEDTPDHFILCIWYAKIQEKTIVWFANRDKPAPEGSKVELSADDGLVLTAPNGEQLWNTGSITVSVSSGVFNDTGNLVLQDGGSNSVWQSFKDYRDTLLPSQTMERGQKLSSKLRRNDFNRGRFELFFQNDGNLVMHSINLPSGYVNDNYYASDTIESNTSSAGTQLVFDRSGDVYILRDNKEKYNLSDGGSGVSYSTTQFYLRATLDFDGVFTLYQHPKGSFGSGGWTPVWSHPDNICKDYLSAASSGVCGYNSICRIGDDKRPNCQCPKWYSLVDPTDPNGSCKPDFVQSCVVDELGKRKDLYDFEVLIDTDWPLSDSVLQKPFTEEQCRQSCMEDCMCSVAIFRLGDSCWKKKLPLSNGRVDATLNGAKAFMKVRKDNSSLVVPPIIVNKNNRNTLIVVGSVLLGGSAFLNLILVGAICLSSSYVFRYKKKLKRVGKSDTKVETNLRCFTYEELEEATNGFDKVLGKGAFGIVYEGVINMGSLTRVAVKRLNTFLLEEVQKEFKNELNSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLEIVSCRKSVEFEEDEEKAILTEWAHDCYKEGVLHNLVENDKEALDDMKTLEKLVMIALWCVQEDPGLRPTMRNVTQMLEGVVEVQVPPCLSSQISIQYSLD 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02145 709 ProSitePatterns Protein kinases ATP-binding region signature. 527 551 IPR017441 GO:0005524
Pumo7g02145 709 CDD B_lectin 45 150 IPR001480 -
Pumo7g02145 709 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 214 IPR036426 -
Pumo7g02145 709 ProSiteProfiles Bulb-type lectin domain profile. 32 151 IPR001480 -
Pumo7g02145 709 PIRSF SRK 569 708 IPR024171 GO:0004674
Pumo7g02145 709 PIRSF SRK 1 571 IPR024171 GO:0004674
Pumo7g02145 709 SUPERFAMILY Protein kinase-like (PK-like) 508 698 IPR011009 -
Pumo7g02145 709 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 570 - -
Pumo7g02145 709 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 151 - -
Pumo7g02145 709 Pfam Protein kinase domain 570 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02145 709 Pfam D-mannose binding lectin 80 167 IPR001480 -
Pumo7g02145 709 SMART blect_4 33 154 IPR001480 -
Pumo7g02145 709 Gene3D Transferase(Phosphotransferase) domain 1 574 693 - -
Pumo7g02145 709 Gene3D - 21 152 IPR036426 -
Pumo7g02145 709 FunFam Serine/threonine-protein kinase 154 301 - -
Pumo7g02145 709 Gene3D Phosphorylase Kinase; domain 1 495 573 - -
Pumo7g02145 709 Gene3D - 153 281 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02145 Pumo-Chr7 59129532 59132206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02145 570 688 Receptor kinase-like Gene Family AT1G60800 35.833 5.84e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo7g02145 Pkinase 7.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02145 - - gmx:106798064 1008.82