Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02144 ATGGTTTCTCATCAGCTTGCCTTTCTCTTTTGCTCAATGGTTTTGCTACAAATCTTTATTGTAGCCCAAACCAGAAGCAACAAAATCATTGGTCACTCTCTTCTTAAAGAAACTAGCAAAGCTTCATGGGTGGTTTCACCTTCTGGTGAAACCAGAAGAAACATAACTGTTGGTGATTCTCTTCTTGCAGAAACAACTAACAACAACTCCTCATCATGGGTGGTTTCACCTCTTGGTGACTTTGCCTTTGGATTTGTCCCACTTGAGGACACTAATTACTTCTTGCTTTCCGTTTGGTATGCTAAGATTCCTGAGAAAACTGTTGTTTGGTATGCCAATGGAGACACTCCTGCACCAAAGGGGTCAAAGGTTGAACTCACTGCTGATGATGGGTTAGTGCTCACTGCCCCAAATGGTGAACTACTGTGGAAAAATGAGAACCATAATGGTAAAGTTGCACTTGGTTTCTTAAAGAACAACGGCAACTTTGTGCTTGTGGATGAAAACCATCAAGGTGTGTGGGAGACTTTTAAGGATCCAAGGGACACCTTGTTGCCCTCACAACTTCTTGAAAAGGGTCAGAGACTTTCATCAAGATTTCTAGAGTCAAATTTCTCAAAGGGAAGGTTTGAGATGCTTCTTCAAATGGATGGTATTCTTTCTATTCATGCTTTGAACTCACCCTCTGAATATGCCAATGAAAACTACTATGAAACTAGGACTGAAGAGTCTAACACATCAAGTCCTGGAACTCGGTTGGTGTTTGAACCATCAGGGTATGTGTATGTTTTGAGGAAGAACAATGAGAAATTCAACTTGGCAACATGGAGTGGAGCCTCTACTAATGAATCTTACTTCAGAGCAACTCTTAATTTTGATGGGGTGTTCACACTCTATCAACATGTAAAGAGTTCCTCTGGGAGTGATGGTTGGAGTCCCATTTGGTCTCAGCCAGATAACATCTGTCTCAGCAGGCTTTCTACTGAAGGTAGTGGTGTTTGTGGGTTTAATAGTTTTTGCACATTGGGAGGTGATCAAAGGCCAAGTTGTCAATGCCCAAAATGGTACTCTTTGGTTGACCCTAATGACCCCTATGGTAGCTGCAAGCCAGATTTCATACAAGGATGTGCAGAAGATGAGCTCATTGGAAGGAATGAAGATGTAGCTGAATATGATTTTGAGGTGTTGATAAATACAGATTGGCCTCTTTCAGATTATGTGCTTCTTGAGCCTTTTACTGAGGAACAATGTAAGCAGTCATGTTTGGAAGATTGTATGTGTGCAGTTACCATTTTCAAATCAGGTAATAGTTGCTTTAAGAAGAAGTTACCTCTTTCAAATGGTAGAGTTGATGCTGGACTTAATGGTGCCAAGACCTTCATCAAAGTGAGGAAAGATAATTCCTCTTTGGTTGTTCCACAAGCCAAAGTGAAGGAGAATAGTAAGAGCACTTTGAGTTTGGTTGCTTGGGTGCTTTTTGGTAGCTCTTCATTTCTCAATGTCCTGTTTATTGGAGCCTTATGCATGAGCTTTTTCTTCATTTTTCAGTACAAGAAGAAGCTTAGAGGAATTGGCAAAAGTGAAAATGCCCTTGAAACTAACTTGCGTTGCTTCAGTTATGAGGAGCTTGAAAGAGCTACCAATGGTTTCCATAAAGAGCTAGGAAGAGGGTCTTTTGGTGTTGTTTATGAAGGAGTCATAAACATAGGCTCAGCAGTTCCAATAGCAGTGAAAAAATTGAACACTTTGCTTTTCCAACAGGTTGAGAAGGAGTTCAAGAATGAGTTACATGTCATTGGTCTCACTCATCACAAGAACTTGGTTCGGTTGATAGGATATTGTGAGGCTGAAGCAGAAAGGTTGCTGGTTTATGAGTACATGAGCAATGGCACTTTGGCAAGTCTTCTTTTCAATAAGGTGAAGCCTAATTGGAAACTGAGGTTAGAGATTGCATTTGGGGTTGCCAGAGGACTTGCATATTTGCATGAAGAGTGCATCACTCAGATTATCCATTGTGACATAAAACCACAAAACATACTCCTTGATGAGTACCATAATGCAAGAATTTCTGACTTTGGATTGGCCAAGCTCTTGAAGATGAATCAAAGCAGAACCAACACTGCCATAAGGGGAACAAAGGGGTATGTGGCACTTGAATGGTTTAAAAATATGCCTATCACAGCCAAAGTGGATGTCTATAGTTATGGTGTGTTGCTGCTTGAGATCATTTGTTGTAGAAGAAATGTAGAAATGGATCTAGAAGAGGAAGAGAAGGCAATATTAACTGATTGGGCTTGTGATTGCTACTCAAGAGGTGTTTTTGATCCCCTGGTTAAGGATGACAAGGAGGCATTGGATGACAAAAAGAACATGGAGAAGTTGGTGATGATTTCCATTTGGTGTGTTCAAGAGGATCCAAGTCTTAGACCCACCATGAGAAAAGTGACACAAATGCTTGAAGGTGTTGTTGAAGTCCAACCTCCACCGTGCCCCTCACAATTTAGTAGAAATTCTCAAAATCATTAA 2526 0.407 MVSHQLAFLFCSMVLLQIFIVAQTRSNKIIGHSLLKETSKASWVVSPSGETRRNITVGDSLLAETTNNNSSSWVVSPLGDFAFGFVPLEDTNYFLLSVWYAKIPEKTVVWYANGDTPAPKGSKVELTADDGLVLTAPNGELLWKNENHNGKVALGFLKNNGNFVLVDENHQGVWETFKDPRDTLLPSQLLEKGQRLSSRFLESNFSKGRFEMLLQMDGILSIHALNSPSEYANENYYETRTEESNTSSPGTRLVFEPSGYVYVLRKNNEKFNLATWSGASTNESYFRATLNFDGVFTLYQHVKSSSGSDGWSPIWSQPDNICLSRLSTEGSGVCGFNSFCTLGGDQRPSCQCPKWYSLVDPNDPYGSCKPDFIQGCAEDELIGRNEDVAEYDFEVLINTDWPLSDYVLLEPFTEEQCKQSCLEDCMCAVTIFKSGNSCFKKKLPLSNGRVDAGLNGAKTFIKVRKDNSSLVVPQAKVKENSKSTLSLVAWVLFGSSSFLNVLFIGALCMSFFFIFQYKKKLRGIGKSENALETNLRCFSYEELERATNGFHKELGRGSFGVVYEGVINIGSAVPIAVKKLNTLLFQQVEKEFKNELHVIGLTHHKNLVRLIGYCEAEAERLLVYEYMSNGTLASLLFNKVKPNWKLRLEIAFGVARGLAYLHEECITQIIHCDIKPQNILLDEYHNARISDFGLAKLLKMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLEIICCRRNVEMDLEEEEKAILTDWACDCYSRGVFDPLVKDDKEALDDKKNMEKLVMISIWCVQEDPSLRPTMRKVTQMLEGVVEVQPPPCPSQFSRNSQNH 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02144 841 Gene3D Phosphorylase Kinase; domain 1 524 626 - -
Pumo7g02144 841 Gene3D - 54 179 IPR036426 -
Pumo7g02144 841 ProSiteProfiles Protein kinase domain profile. 548 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02144 841 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 65 832 - -
Pumo7g02144 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Pumo7g02144 841 CDD STKc_IRAK 554 821 - -
Pumo7g02144 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 50 178 - -
Pumo7g02144 841 CDD B_lectin 75 180 IPR001480 -
Pumo7g02144 841 ProSitePatterns Protein kinases ATP-binding region signature. 554 579 IPR017441 GO:0005524
Pumo7g02144 841 Pfam Protein kinase domain 551 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02144 841 Gene3D Transferase(Phosphotransferase) domain 1 627 826 - -
Pumo7g02144 841 Pfam D-mannose binding lectin 107 191 IPR001480 -
Pumo7g02144 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 231 IPR036426 -
Pumo7g02144 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 627 827 - -
Pumo7g02144 841 FunFam S-receptor-like serine/threonine-protein kinase 518 626 - -
Pumo7g02144 841 ProSiteProfiles Bulb-type lectin domain profile. 59 178 IPR001480 -
Pumo7g02144 841 SMART serkin_6 548 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02144 841 FunFam Serine/threonine-protein kinase 181 325 - -
Pumo7g02144 841 Gene3D - 181 319 IPR036426 -
Pumo7g02144 841 SUPERFAMILY Protein kinase-like (PK-like) 535 833 IPR011009 -
Pumo7g02144 841 PIRSF SRK 11 841 IPR024171 GO:0004674
Pumo7g02144 841 SMART blect_4 64 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02144 Pumo-Chr7 59125419 59128231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02144 534 831 Receptor kinase-like Gene Family AT1G60800 39.432 2.19e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo7g02144 Pkinase 6.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02144 - - pvu:PHAVU_010G032000g 1510.35