Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02141 ATGGTCAAGTCATGTTGCACTATGTGCTTGTGTTTGGTGTTACTTCACATTTTCCCGTGCTTTGTGCCAACGAAGTCAGCACCTGAAAGTGCCATTGTAACACAGATTCCTGGCTTCAGTGGTACTCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGATGAGAGTCATGGGAGGAACTTGTACTACTATTTTGTTGAATCAGAGGGTAAACCTTCGGAGGACCCTGTAGTTCTGTGGCTTAATGGGGGACCAGGCTGCTCTAGCTTTGATGGATTCGTATATGAGCATGGTCCTTTTAATTTTGAGGCAGCAAAGACAAGGGGGGGTCTGCCCACACTGCACCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTTATATATTTGGATTCTCCTGCTGGTGCGGGGTTTTCATACTCACAGAATAAAACTGATTACATAACTGGAGACATAAAGACTGCCTCTGATTCACATGCCTTTCTCCTTAAGTGGTTTGAACTGTACCCCGAGTTCCTTTCCAACCCATTCTTCATTGCTGGAGAGTCATATGCAGGAGTTTATGTGCCTACTCTTGCTTCTGAAGTAGTGACAGGAAATGAGGATGGTGTGGAGCCCAAACTGAATTTCAAGGGTTACATGGTTGGAAATGGTGTCACAGATGAACAATTTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGACTTATCCCAGATGAACTGTTTGAGGAGGTTAACCGTGAGTGCAATGGGAATTTTTATAATCCAACAAGTGATAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAGTTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGCCACAGAGGCAGAGAATATTACAGAACCCTATATTAGGTTGCCATCTAGCTTCCGGAAATTGGGTGAGACTGAAAGACCTTTTCCTGTGAGGAAAAGAATGTTTGGTCGTTCTTGGCCCCTCAGAGCACCTGTGAGAGATGGAATTGTACCAACTTGGCCACAGCTGATGAATAGTCAAGTTGCTCCACCATGCACGGACGACGAGTTTGCAAATGCATGGTTGAACAATGAAGCAGTCAGGACAGCAATTCATACTGCACAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACTGACAGAATTTACTTCGATCATGATGCTGGGAGCATGATCAAGTACCACAAGAACTTAACTTCCAAAGGTTATAGAGCACTTATATTCAGCGGCGATCATGACATGTGTGTTCCATATACGGGGAGTCAATCGTGGACGAGATCAGTTGGATACAAGATTGTTGATGAATGGAGGCCTTGGTCATCCAATGGTCAAGTTGCTGGGTATACACAAGGATACGACAAAAATCTTACTTTTCTGACCTGTAAAGGTTTGTATATACATACATGTCAAATAAGAGAATTAGAGGTAAAAAGAGGTCACATTGACCATTCATTCTTATGGTCAAGATGA 1497 0.4302 MVKSCCTMCLCLVLLHIFPCFVPTKSAPESAIVTQIPGFSGTLPSKHYAGYVTVDESHGRNLYYYFVESEGKPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTRGGLPTLHLNPYSWSKVSSVIYLDSPAGAGFSYSQNKTDYITGDIKTASDSHAFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLASEVVTGNEDGVEPKLNFKGYMVGNGVTDEQFDGNALVPFVHGMGLIPDELFEEVNRECNGNFYNPTSDNCSSKLSKVDELVDEINIYNILEPCYHATEAENITEPYIRLPSSFRKLGETERPFPVRKRMFGRSWPLRAPVRDGIVPTWPQLMNSQVAPPCTDDEFANAWLNNEAVRTAIHTAQKSVVSSWDLCTDRIYFDHDAGSMIKYHKNLTSKGYRALIFSGDHDMCVPYTGSQSWTRSVGYKIVDEWRPWSSNGQVAGYTQGYDKNLTFLTCKGLYIHTCQIRELEVKRGHIDHSFLWSR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02141 498 Gene3D alpha/beta hydrolase 25 316 IPR029058 -
Pumo7g02141 498 SUPERFAMILY alpha/beta-Hydrolases 33 471 IPR029058 -
Pumo7g02141 498 FunFam Carboxypeptidase 351 485 - -
Pumo7g02141 498 Gene3D - 350 473 - -
Pumo7g02141 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Pumo7g02141 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pumo7g02141 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Pumo7g02141 498 Pfam Serine carboxypeptidase 37 472 IPR001563 GO:0004185|GO:0006508
Pumo7g02141 498 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Pumo7g02141 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 471 IPR001563 GO:0004185|GO:0006508
Pumo7g02141 498 FunFam Carboxypeptidase 26 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02141 Pumo-Chr7 59064237 59088237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02141 359 472 Calmodulin-binding Proteins AT2G22960 45.614 1.03e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02141 K16296 - gmx:100792057 937.562