Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02136 ATGGATTTGGAAGCTGTGGCAGAAACTGTTGAAAATTCTGCTGAGATAATATCAACAGCATGTGAAGGCAGTTCCATTGGGGAGCCAAATGTTGGGATGGAGTTTGAGTCTGAAGAAGCTGCCAAGAACTTTTACGACGAATATGCAAGACGGGAAGGATTCATTGTGCGCCTTGATCGCTGCCATCGTTCCGAGGTTGACAAGCAGATCATTTCGCGCCGTTTTTCATGCAATAAGCAAGGTTTTCATGTGAGGGTTAGAAATAAAACCAAATCTGTTCATAAACCACGGGCTAGCATACGAGAAGGCTGTGAAGCTATGATGTTTGTTAAAGTTAATAAATGTGGAAAGTGGGTGGTTACTAAATTTGTGAAGGAACACAGTCATCTGCTAAATGCTTCTGCTTCGCCTTCATATAATAAAATGATTGAGTCAAAGGATAGGATAATTCAACAACTCACGAAGGAACTTGAGCACCGAGATCGATTATGTCAGCAATATCGCAGGCAGCTATTCTCCCTTCTGGAAACTGTTGATGAACAAACAGAATGTTTATCAAAAAAAGTTGAACTTGTTGTTAACAATGTAAAAAAAATTGAGAATAAAGTGCAAAAACCTTTGAACAATGACTAA 633 0.3934 MDLEAVAETVENSAEIISTACEGSSIGEPNVGMEFESEEAAKNFYDEYARREGFIVRLDRCHRSEVDKQIISRRFSCNKQGFHVRVRNKTKSVHKPRASIREGCEAMMFVKVNKCGKWVVTKFVKEHSHLLNASASPSYNKMIESKDRIIQQLTKELEHRDRLCQQYRRQLFSLLETVDEQTECLSKKVELVVNNVKKIENKVQKPLNND 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02136 210 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
Pumo7g02136 210 Coils Coil 150 170 - -
Pumo7g02136 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02136 Pumo-Chr7 58995227 58998336 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo7g02136 FAR1 4.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02136 - - pvu:PHAVU_010G032600g 337.421