Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02135 ATGTATCTTTCAAAAAATAATATGCCTCCCTTCAATGTGAATGTTCTGGTTGTTGATGGAGATGCTACTGCACTCAACACAACACTGGAAATACTAACTTCCTTGAATTACAAAGCTGTAGGTGCCAGACATGCCTCACATGCTTTGGATAAACTTCGAAATCAAAAAGGATATTTTCATCTCATTGTTACGGAAGTTAATATGCTAGATCTTGATGGATTCAAACTAAAACAAATCGTTGATGAAGAATTTTCAATACCAGTCATAATGATTTCAGTTGACAATAGTGAAGAAATCCAGAAAAAAGCTCTAATGTCTGGTGTAATGCGTTATATATTAAAACCAGCAAAAGCAGAAGACTTTGTAGGTATTTGGCAATTTGCAGTAGCTGTAATGAAAGGTAAGACGCCAACTAACACAAAAATAGTTGGAGATACCATTATAAAATCAAATGGTGAGAGCAAGAATCATAAAGAATTGAGTTGTTCATCATTTAGACAAGAAGATAGCAAGGTTGAGGAAAAAAGTGATGACATGGAACAATCATTGATGGATACTGGGAAAGATAATGGATCTACTACCCGTAAGAAGACCAAAGTTGTTTGGACAAAAGATCTTCAAAGTCGATTCGAGGAAGCCCTTGATATTCTTGGCCCAGAGAATGAATTTCCAACAAAAATTCTCAAAGTCATGAATGTTGAAGGGTTAACTAGGAGTAGTGTGGCAAGTCATTTGCAGAAATATAGGCTTTACTTAGGCCAAGTTGAAAGAATATTTGCTGCAGTAATAAAGAAAGCAAATGAAGACAATGATGTCTATTTGTCTAAGAAGGCATCAACAGACTCGTCACTAGTGTTTAAACTCATCAAAGAAGATTTAGAGAAAACTATGAAGCAAAGAAAAAGGAGACGTTTAGAATATTTAGAATCCAATTATGTATATATATCTCACTTAAGATCCAAACTATCCATTTTATTGAGTAAATCTGACAACTATAGTGATAACAAACTAAATCCTTATGTGAAAAGGGATCCCCCATCAGGCAAAATTAATAGCCTTGCAACAAAATCAAATTTAGTGCAATACAATGAGACATCACAAAATCCCTCAATTAGCCCTTCTGGAATACTTAGATTGGGCCAAGCATCAAGTTCCAATGTTGCCAAGTACAATGTTGTAGGGTTGTTGAAACCAAGTTCTTCTAGTTTGGTTGGAGGAGTAGGGTTTACTACTAGTGAGGCTTATACCAAAAACCAAAGTTTGCCAATATCAATAGGGGACACTAACATTGTTGGAAATATTATGGGAGGAAACTTATTTCAACCCCAACAACAACACCAGATTTATAGTCAAGGATATCATCAAACTTTTGCAACTATGAACAACAATTTTTCTTCTCAAGGAACATCTTATGGGTCTCATTTCAAAGGAATTGATGATGCTTTCACGATTGAAGGCATTCTTAATAAAGTCCCCATGCAGGTATGTAAAATGACTTCTCTAGCTGCCATGATAATTGTTTCTTCCCTTCATGTTTAG 1539 0.3515 MYLSKNNMPPFNVNVLVVDGDATALNTTLEILTSLNYKAVGARHASHALDKLRNQKGYFHLIVTEVNMLDLDGFKLKQIVDEEFSIPVIMISVDNSEEIQKKALMSGVMRYILKPAKAEDFVGIWQFAVAVMKGKTPTNTKIVGDTIIKSNGESKNHKELSCSSFRQEDSKVEEKSDDMEQSLMDTGKDNGSTTRKKTKVVWTKDLQSRFEEALDILGPENEFPTKILKVMNVEGLTRSSVASHLQKYRLYLGQVERIFAAVIKKANEDNDVYLSKKASTDSSLVFKLIKEDLEKTMKQRKRRRLEYLESNYVYISHLRSKLSILLSKSDNYSDNKLNPYVKRDPPSGKINSLATKSNLVQYNETSQNPSISPSGILRLGQASSSNVAKYNVVGLLKPSSSSLVGGVGFTTSEAYTKNQSLPISIGDTNIVGNIMGGNLFQPQQQHQIYSQGYHQTFATMNNNFSSQGTSYGSHFKGIDDAFTIEGILNKVPMQVCKMTSLAAMIIVSSLHV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02135 512 Gene3D - 193 255 - -
Pumo7g02135 512 MobiDBLite consensus disorder prediction 158 194 - -
Pumo7g02135 512 FunFam Two-component response regulator 193 256 - -
Pumo7g02135 512 Gene3D - 10 132 - -
Pumo7g02135 512 SMART REC_2 13 125 IPR001789 GO:0000160
Pumo7g02135 512 Pfam Response regulator receiver domain 15 121 IPR001789 GO:0000160
Pumo7g02135 512 ProSiteProfiles Response regulatory domain profile. 14 129 IPR001789 GO:0000160
Pumo7g02135 512 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 361 IPR045279 GO:0009736
Pumo7g02135 512 SUPERFAMILY CheY-like 13 130 IPR011006 -
Pumo7g02135 512 NCBIfam myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677
Pumo7g02135 512 SUPERFAMILY Homeodomain-like 194 252 IPR009057 -
Pumo7g02135 512 Pfam Myb-like DNA-binding domain 200 249 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02135 Pumo-Chr7 58977339 58982328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02135 10 258 Response Regulator Gene Family AT2G25180 35.857 4.63e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pumo7g02135 Response_reg 5.2e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02135 - K14491 aprc:113850659 448.743