Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02106 ATGCAAGGAGGTCAAGTATATGCTGTGAAAAAGTTGAAGTGTGATGCAGACAACTTGGACATTGAGAGTATAAAATCCTTTCAGAGTGAGGTAGAAGCCATGACAGAAACGCGCCATCGAAACATCGTCAAGCTATACGGATTTTGCTCCGAAGGGATGCACACATTCTTAATTTATGAGTACATGGATAGAGGCAACTTATTTGACATGTTGAGAGATGAAAAGGATGCATTAGAACTGGATTGGCACAAGAGGGTTGAAATTATCAAAGGTGTAGCAAGCGCTCTGTCCTATATGCATCATGATTGTGCTCCACCTTTGATTCACAGAGACGTATCAAGCAAGAACGTTTTGCTGTCCTCCAATCTTGTAGCTCATGTCTCAGATTTTGGAACTGCAAGGTTTCTCAGGTCTGACTCGTCTATTTGGACATCATTTGTTGGCACATACGGTTATGCTGCTCCAGAGCTTGCCTACACAATGGCACCGACCGAGAAATGTGATGTGTTCAGCTTTGGCATTTTGGCTTTGGAGGTTCTTACAGGAAAGCACCCCGGTGACCTTGTTTCCTACATACAAACTTCTAGTGAACAAAAAGTAAACTTGAAGGAGATTTTAGACCCTCGCCTCTCGACTCCTGCCAAGAACCATATTTTGAAGGAATTGGTTTTGATTGTCGACCTAGCTCTCTCATGTTTAAAAGCAAACCCTCAATCTCGACCAACTATGCGAAACATAGCTCAGCTACTTGAAATGGAGACTGCATAA 768 0.4271 MQGGQVYAVKKLKCDADNLDIESIKSFQSEVEAMTETRHRNIVKLYGFCSEGMHTFLIYEYMDRGNLFDMLRDEKDALELDWHKRVEIIKGVASALSYMHHDCAPPLIHRDVSSKNVLLSSNLVAHVSDFGTARFLRSDSSIWTSFVGTYGYAAPELAYTMAPTEKCDVFSFGILALEVLTGKHPGDLVSYIQTSSEQKVNLKEILDPRLSTPAKNHILKELVLIVDLALSCLKANPQSRPTMRNIAQLLEMETA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02106 255 ProSitePatterns Tyrosine protein kinases specific active-site signature. 107 119 IPR008266 GO:0004672|GO:0006468
Pumo7g02106 255 PANTHER LEUCINE RICH REPEAT KINASE 2 3 252 - -
Pumo7g02106 255 Gene3D Transferase(Phosphotransferase) domain 1 63 255 - -
Pumo7g02106 255 SUPERFAMILY Protein kinase-like (PK-like) 3 251 IPR011009 -
Pumo7g02106 255 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02106 255 PIRSF ILK 2 254 - -
Pumo7g02106 255 Pfam Protein kinase domain 4 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02106 255 Gene3D Phosphorylase Kinase; domain 1 1 62 - -
Pumo7g02106 255 FunFam MDIS1-interacting receptor like kinase 2 62 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02106 Pumo-Chr7 57987331 57988731 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02106 1 250 Receptor kinase-like Gene Family AT5G49660 41.509 2.02e-57 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo7g02106 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02106 - - aprc:113866080 444.891