Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02103 ATGTCTCTGAACGTTACAATGAACAACCGTACATGTTATGCCTGCTTTGCAATTCCAGCTACGTTGGTGGTTTTGCTGGCTCTTTGTGAGGGCACTTCAGGGCTAACACAAGCTGAGGCCCTTCTCAGGTGGAAACAAAGTCTCCCTCACCAACCCATTTTGGACTCATGGCTGATCAACTCCACTGCTGCAAGCCCGTGTTCGTGGCGAGGCATTACCTGTGATTCTCAAGGCAGTGTGACCATAATCAACTTGGCTAACACCGGACTTGCAGGCACCCTTCGAAACATGAACCTGTCCGTTTTTCGTAACCTTCTTCGCCTTGATCTCAGCGACAACGATCTCAGTGGCTCCATTCCGCGAAACATTGGGATGCTCTCAAAGCTCCAACTCCTTGATCTTTCCACCAACTATCTAAACGGCACTCTGCCTCTTTCTATTGCCAATCTGACTCAAGTTTATGAGCTTGATGTTTCAAGAAATAACATAACAGGGATATTAGACCCTCGGTTATTTCCTGATGGGTCCAAAATTGGCCTCATTGGTATCAGGAATCTTCTCTTCCAGCACACCCTGCTAGGTGGCAGAATCCCAAAAGAAATAGGGAACATTAGAAACTTGACACTGCTAGCTCTAGATGGAAACAACTTCTATGGTCCTATTCCTCCATCTCTAGGCAACTGCACACATTTAAGCGTTCTTAGAATGGCTTACAACCAACTCACAGGCCCAATACCCCCAAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCCTTTTCAATAACAACTTAAACGGTACGGTGCCCCAGGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCGGAAAACAACTTCGTTGGCGAATTGCCACCGCAAGTGTGCAAAAGAAGCACACTTGTGAATTTCAGTGCTGCCTACAATGGTTTCACTGGCCCAATTCCGAGAAGCCTTAGAAACTGCTCATCCTTGTATAGAGTTCGGCTTGAATACAACCGGCTGACGGGTTATGCAGATCAGGTTTTTGGAGTGTATCCTAACCTCACTTACATGGACTTCAGCTACAACAGGGTGGAAGGTGATCTCTCTGCCAATTGGGGTGCCTGCAAAAACTTGCAGTTACTCAAAATGGCTGGGAATGCAGTGAGTGGCAACATTCCAGGTGAGGTTTTTCGGTTGGACCAACTGCGAGAGCTTGATCTATCCTCTAACCAAATATCAGGGGAGATTCCTCAACAGATAGGAAACTCCTCCAACTTGTTTGAATTGAATTTGAGTGACAACAAACTCTCTGGTATGGTACCAGAAGAAATTGGAAAGCTATCCAATTTGCAGTCCTTAGACCTGTCTATGAACCTGTTATTGGGACCAATTCCAAATCAGATAGGGGACATCTCCATCTTGCAGAATTTAAATCTGAGCAACAATGACTTTAATGGCACAATCCCCTACCAAATTGGAAACCTTGCTTATTTAGAAGACTTTTTGGACTTGAGTTACAATTCACTTTCAGGAGAAATCCCTGCTGATTTTGGGAAGCTTTCAATTTTGATAAGCTTGAATATCTCTCACAACAATCTCTCAGGGTCTATTCCTCACTCCCTTGGTGAAATGTTGAGTTTGTCAGCCATCAACCTCTCCTTCAACAATTTGGAGGGTCCAGTTCCTAAAGGTGGCATATTCAAGTCTTCTTCTCAACCCCTGGATTTGAGCAACAACAAAGATTTATGTGGGAATATTCGAGGTTTGCATCCTTGTAATGTCTCTCTCCCTAAACCTGATAGGGGACCAAGGAACAAAAACAAGCTTGTGATCCCTATTGTTGCTTCCTTTGGAGGTGTTCTTTTTCTTTCTTTGGTGTTAGTTGGGATTTTTCTCTCTAGCTATAAGAGAAAATCAAGAGCTCCAAGAGAAGGAAATTCATTCAGACAACCGAATCCATTTTCAATTTGGTACTTCAATGGCAGAGTTGTGTATAGAGACATAATAGAAGCTACCAACAACTTTGACAACCAGTATTGCATTGGAGAAGGAGCAGTGGGAAAAGTTTATAAAGCAGAAATGCAAGGAGGTCAAGTATATGCTGTGAAAAAGTTGAAGTGTGATGCAGACAACTTGGACATTGAGAGTATAAAATCCTTTCAGAGTGAGGTAGAAGCCATGACAGAAATGCGCCACCGAAACATCGTCAAGCTATACGGATTTTGCTCCGAAGGGATGCACACATTCTTAATTTATGAGTACATGGATAGAGGCAACTTATTTGACATGCTGAGAGATGAAAAGGATGCATTAGAACTGGATTGGCACAAGAGGGTTGAAATTATCAAAGGTGTAGCAAGCGCTCTGTCCTATATGCATCATGATTGTGCTCCACCTTTGATTCACAGAGACGTATCAAGCAAGAACGTTTTACTGTCCTCCAATCTTGTAGCTCATGTCTCAGATTTTGGAACTGCAAGGTTTCTCAGGTCTGACTCGTCTATTTGGACATCATTTGCTGGCACATACGGCTATGCTGCTCCAGAGCTTGCCTACACAAGGGCACCGACTGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTGGAGGTTTTTATGGGAAAGCACCCTGGTGACCTTGTTTCCTACATACAAACTTCTAGTGAACAAAAAGTAAACTTGAAGGAGATTTTAGACCATCGCCTCTCTACTCTTGCCAAGAACCATATTTTGAAGGAATTGGTTTTGATTGTCGACCTAGCTCTCTCATGTTTGAAAACAAACCCTCAATCTCGACCAACTATGCGAAACATAGCTCAACTGCTTGAAAATGGAGACTGCATAAGATAA 2844 0.4325 MSLNVTMNNRTCYACFAIPATLVVLLALCEGTSGLTQAEALLRWKQSLPHQPILDSWLINSTAASPCSWRGITCDSQGSVTIINLANTGLAGTLRNMNLSVFRNLLRLDLSDNDLSGSIPRNIGMLSKLQLLDLSTNYLNGTLPLSIANLTQVYELDVSRNNITGILDPRLFPDGSKIGLIGIRNLLFQHTLLGGRIPKEIGNIRNLTLLALDGNNFYGPIPPSLGNCTHLSVLRMAYNQLTGPIPPSIGKLTNLTDVRLFNNNLNGTVPQEFGNLSSLIVLHLAENNFVGELPPQVCKRSTLVNFSAAYNGFTGPIPRSLRNCSSLYRVRLEYNRLTGYADQVFGVYPNLTYMDFSYNRVEGDLSANWGACKNLQLLKMAGNAVSGNIPGEVFRLDQLRELDLSSNQISGEIPQQIGNSSNLFELNLSDNKLSGMVPEEIGKLSNLQSLDLSMNLLLGPIPNQIGDISILQNLNLSNNDFNGTIPYQIGNLAYLEDFLDLSYNSLSGEIPADFGKLSILISLNISHNNLSGSIPHSLGEMLSLSAINLSFNNLEGPVPKGGIFKSSSQPLDLSNNKDLCGNIRGLHPCNVSLPKPDRGPRNKNKLVIPIVASFGGVLFLSLVLVGIFLSSYKRKSRAPREGNSFRQPNPFSIWYFNGRVVYRDIIEATNNFDNQYCIGEGAVGKVYKAEMQGGQVYAVKKLKCDADNLDIESIKSFQSEVEAMTEMRHRNIVKLYGFCSEGMHTFLIYEYMDRGNLFDMLRDEKDALELDWHKRVEIIKGVASALSYMHHDCAPPLIHRDVSSKNVLLSSNLVAHVSDFGTARFLRSDSSIWTSFAGTYGYAAPELAYTRAPTEKCDVFSFGVLALEVFMGKHPGDLVSYIQTSSEQKVNLKEILDHRLSTLAKNHILKELVLIVDLALSCLKTNPQSRPTMRNIAQLLENGDCIR 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02103 947 ProSiteProfiles Protein kinase domain profile. 672 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02103 947 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Pumo7g02103 947 Pfam Protein kinase domain 677 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02103 947 PRINTS Leucine-rich repeat signature 444 457 - -
Pumo7g02103 947 PRINTS Leucine-rich repeat signature 399 412 - -
Pumo7g02103 947 Gene3D Ribonuclease Inhibitor 176 249 IPR032675 -
Pumo7g02103 947 FunFam Leucine-rich repeat receptor-like protein kinase TDR 273 591 - -
Pumo7g02103 947 FunFam Leucine-rich repeat receptor protein kinase MSP1 634 751 - -
Pumo7g02103 947 Gene3D Transferase(Phosphotransferase) domain 1 752 945 - -
Pumo7g02103 947 FunFam Leucine-rich repeat receptor protein kinase EMS1 176 272 - -
Pumo7g02103 947 FunFam MDIS1-interacting receptor like kinase 2 752 944 - -
Pumo7g02103 947 SUPERFAMILY RNI-like 287 576 - -
Pumo7g02103 947 ProSitePatterns Tyrosine protein kinases specific active-site signature. 797 809 IPR008266 GO:0004672|GO:0006468
Pumo7g02103 947 Gene3D Ribonuclease Inhibitor 345 593 IPR032675 -
Pumo7g02103 947 FunFam Nuclear pore complex protein NUP107 35 173 - -
Pumo7g02103 947 PANTHER LEUCINE RICH REPEAT KINASE 2 93 234 - -
Pumo7g02103 947 Gene3D Ribonuclease Inhibitor 250 344 IPR032675 -
Pumo7g02103 947 SUPERFAMILY Protein kinase-like (PK-like) 646 940 IPR011009 -
Pumo7g02103 947 Gene3D Phosphorylase Kinase; domain 1 642 751 - -
Pumo7g02103 947 Gene3D Ribonuclease Inhibitor 35 173 IPR032675 -
Pumo7g02103 947 SUPERFAMILY L domain-like 61 387 - -
Pumo7g02103 947 SMART LRR_typ_2 444 468 IPR003591 -
Pumo7g02103 947 SMART LRR_typ_2 252 275 IPR003591 -
Pumo7g02103 947 SMART LRR_typ_2 102 126 IPR003591 -
Pumo7g02103 947 SMART LRR_typ_2 517 541 IPR003591 -
Pumo7g02103 947 SMART LRR_typ_2 150 174 IPR003591 -
Pumo7g02103 947 SMART LRR_typ_2 396 420 IPR003591 -
Pumo7g02103 947 SMART LRR_typ_2 276 300 IPR003591 -
Pumo7g02103 947 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02103 Pumo-Chr7 57885025 57889074 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02103 14 845 Receptor kinase-like Gene Family AT4G08850 38.741 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo7g02103 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02103 - - aprc:113866080 1510.35