Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02101 ATGGAATCTGTGTTCGTTCCAGAAGTTATTTGCATTTCAGCTACTGATCCCGACGCCACAGACTCGTCCAGCGGTGATGACGACGACAGGCTTCTTCACCTCCCCAGGTTCAACAAAGTGGTCAACGAAATCAAACTTGAGTGCCACGAAAACAAAAAGAATGGCGCTACTGAAAGTCTCAAGCAACACAAGAAGTTTCACGGTGTGCGGCGATGGCCTTGGGGTGGATGGGAAGCGAGGATAAGAGACCCTTTGCAGAAAAAGCGAGTGTGGCTTGGCACCTACGGCACTGCTGAAGAGGCTGCAATGGCTCACGACAGAGCCGCTATTAGTTTCAAAGGAGACGCTGATGCTGTTACAACTTTCATCAAACCACCATTGAAAGATTGTAATCTTGTGATTAATGGAACAAGTAGCGCATGTCCTTCACCCACATCTGATTCTGTGTTTCAGCCATGGAGGGAATCACCGGTATCTTTGGAAGAAACCTTCAAAGAAGAAGAACAAGTGTTGTTTAACGGGTAA 525 0.4724 MESVFVPEVICISATDPDATDSSSGDDDDRLLHLPRFNKVVNEIKLECHENKKNGATESLKQHKKFHGVRRWPWGGWEARIRDPLQKKRVWLGTYGTAEEAAMAHDRAAISFKGDADAVTTFIKPPLKDCNLVINGTSSACPSPTSDSVFQPWRESPVSLEETFKEEEQVLFNG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02101 174 Gene3D AP2/ERF domain 64 124 IPR036955 GO:0003700|GO:0006355
Pumo7g02101 174 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Pumo7g02101 174 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Pumo7g02101 174 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Pumo7g02101 174 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 7 141 - -
Pumo7g02101 174 Pfam AP2 domain 65 113 IPR001471 GO:0003700|GO:0006355
Pumo7g02101 174 SMART rav1_2 65 129 IPR001471 GO:0003700|GO:0006355
Pumo7g02101 174 ProSiteProfiles AP2/ERF domain profile. 65 123 IPR001471 GO:0003700|GO:0006355
Pumo7g02101 174 SUPERFAMILY DNA-binding domain 65 115 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02101 Pumo-Chr7 57812145 57812669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02101 9 126 AP2-EREBP Transcription Factor Family AT4G27950 40.580 4.47e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo7g02101 AP2 4.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02101 - - gmx:100815537 152.91