Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02089 ATGGTTCTGCATAGCTGGATTTTCAATTATTACATTCTTGTTAATTTCTTGTTGCTGATTAGTTGTGGCATGACCTATGGGACTGAGACTGATATCTTCTGCTTGAAAAGTATCAAAGAGTCCCTTGAAGACCCCTACAATTATTTGAAGTTCTCTTGGGATTTCAACAACAATACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAACTGTCCAATATGGGACTCAAGGGCCAGTTTCCTCACACAATTCAAAATTGCTCGAGTTTAACTGGATTAGACCTTTCAATTAACAAACTCTCCGGAACCATTCCAGTAGATATATCTACTCTTATACCGTTTGCGACGTCTGTTGACCTATCTTCAAATGAGTTTTCTGGGGCGATTCCTGTGAGTCTCGCAAATTGTACATTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGTCAAATTCCTCCACAATTTGGTGTTCTCTCTCGAATTAAGACATTTTCTGTATCCAACAATCTTTTGACGGGACAAGTTCCAATCTTTACCAAGGGTGGTGTTGAGGTAAATTATGCAAATAATCAAGGCCTATGTGGAGGACCTACATTGGGGGCTTGCCAAGCCAAGTCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTCGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACATGTTTCTTTCAAGAAGAAGGAAGAGGACCCTGAAGGAAACAAATGGGCAAGAAGTCTCAAAGGAACTAAACAAATTAAGGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGTCAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGATGATGGCACAACACTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACACTAGGTACTGTCAAACATCGCAACCTGGTTCCTCTTTTGGGTTTTTGCATGGCCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTGCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGCTGGACGCTGATTTTGAGCCGAAAATTTCTGATTTCGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTAGGTTATGTTGCTCCTGAGTACGCAAGAACCTTGGTTGCTACACCGAAAGGGGATGTTTACAGCTTTGGAACTGTTCTTCTTGAATTGGTGACAAGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATCACGGAGCTCACAAACAACGCAAAACTCCATGATGCCATTGATGAATCGCTAGTCAGCAAGGATGTTGATAGTGAGCTTTTCCAATTCCTAAAGGTTGCATGCAACTGTGTCTTACCAACTCCAAAGGAGAGGCCAACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGAGATATTGGTACCTATTGATATTGGTGATACTGATAACATGGCGGAACTTATTGTAGCTCAAGAAGGAAGTTATTGA 1848 0.4161 MVLHSWIFNYYILVNFLLLISCGMTYGTETDIFCLKSIKESLEDPYNYLKFSWDFNNNTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPHTIQNCSSLTGLDLSINKLSGTIPVDISTLIPFATSVDLSSNEFSGAIPVSLANCTFLNTLKLDQNRLTGQIPPQFGVLSRIKTFSVSNNLLTGQVPIFTKGGVEVNYANNQGLCGGPTLGACQAKSSKSNMAVIAGAAAGGVTLAALGLGIGMFFFVRHVSFKKKEEDPEGNKWARSLKGTKQIKVSMFEKSISKMKLSDLMKATNNFSNTNIIGSGRTGTVYKAVLDDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMAKRERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTSERPTNVSKAPETFKGNLVEWITELTNNAKLHDAIDESLVSKDVDSELFQFLKVACNCVLPTPKERPTMFEVYQLLRAIGGRYNFTTEDEILVPIDIGDTDNMAELIVAQEGSY 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02089 615 Pfam Protein tyrosine and serine/threonine kinase 306 576 IPR001245 GO:0004672|GO:0006468
Pumo7g02089 615 SUPERFAMILY L domain-like 31 193 - -
Pumo7g02089 615 Gene3D Transferase(Phosphotransferase) domain 1 378 592 - -
Pumo7g02089 615 SUPERFAMILY Protein kinase-like (PK-like) 280 577 IPR011009 -
Pumo7g02089 615 ProSiteProfiles Protein kinase domain profile. 303 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02089 615 Gene3D Ribonuclease Inhibitor 29 219 IPR032675 -
Pumo7g02089 615 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 378 597 - -
Pumo7g02089 615 CDD STKc_IRAK 309 577 - -
Pumo7g02089 615 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Pumo7g02089 615 FunFam Nuclear pore complex protein NUP107 28 192 - -
Pumo7g02089 615 Gene3D Phosphorylase Kinase; domain 1 264 376 - -
Pumo7g02089 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 49 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02089 Pumo-Chr7 57121232 57125281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02089 16 591 Receptor kinase-like Gene Family AT3G28450 45.955 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pumo7g02089 PK_Tyr_Ser-Thr 1.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02089 - - gmx:100305365 1039.25