Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02026 ATGAGAAGAAAAGGGTCGTCGGAGGTGGTGGGTGGTGACGTGGTCGCCGGAGACGATGGAAGAGCTACAACGGTGGAGAGAGGGAGGAAGAATGAGGTTTTGCAGAGGAGCTCTCTGAAGATTAATGCAATTACCAAAAAATGGGAACCCACCAAGGTTGTGCCTCAGGCTGATAGAGTTCTTATTCGTTTGGAGGAGCTATCAGATAAAACAGTTGGTGGAGTTTTGCTGCCCAAGTCAGCTGTTAAATTTGAGCGATATCTCGTGGGAGAAATCCTAACTGTTGGTGCTGACGCTGGAGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATGAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAACACTGCTTCTGTAAAGCAAGTGACTTATTGGCCGTGGTTGAGTAG 420 0.4714 MRRKGSSEVVGGDVVAGDDGRATTVERGRKNEVLQRSSLKINAITKKWEPTKVVPQADRVLIRLEELSDKTVGGVLLPKSAVKFERYLVGEILTVGADAGELKAGTKVLFTDMNAYEVDLGTDAKHCFCKASDLLAVVE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02026 139 SMART Cpn10_2 52 138 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 MobiDBLite consensus disorder prediction 1 21 - -
Pumo7g02026 139 PRINTS 10kDa chaperonin signature 77 98 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 PRINTS 10kDa chaperonin signature 53 68 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 PRINTS 10kDa chaperonin signature 103 115 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 PRINTS 10kDa chaperonin signature 125 138 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 Gene3D GroES chaperonin 47 139 IPR037124 GO:0006457
Pumo7g02026 139 PANTHER 10 KDA HEAT SHOCK PROTEIN 51 137 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 Pfam Chaperonin 10 Kd subunit 52 138 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 SUPERFAMILY GroES-like 52 139 IPR011032 -
Pumo7g02026 139 CDD cpn10 52 138 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pumo7g02026 139 FunFam 10 kDa chaperonin 48 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02026 51 139 Calmodulin-binding Proteins AT5G20720 31.579 5.08e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02026 K04078 - gmx:100500567 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g02026 7 54958053 54963392 Pumo7g02026 7 54958053 54963392 ECH