Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02013 ATGCTCCGCCGCGCAACCTCCGCCCTCCTCTCCGGCGCCTCCCGCCGCCGCCTCTCCACGGACGTGCCGGCGACTCCCTCGGCGGATTCCGGCTTCGCGGAGGCGTGGAAGAAAGTGAGCCCCAACATCGACCCACCCCAGACGCCGCTCGCGTACATGAAGCCCCGACCACCCACTCCTTCTACTCTCCCTTCCAAACTCACCGTCAACTTCGTCTTACCCTACGCGTCTCAATTGGCCGCAAAAGAGGTTGATATGGTCATTGTACCAGCAACAACTGGGCAGATGGGTGTTCTCCCAGGACATGTAGCAACAATTGCAGAGTTGAAACCTGGTGTCCTATCTGTACATGAAGGGAACGATGTGACTAAGTACTTTATCAGCAGTGGCTTTGCATTCATCCATGCAAACTCTGTTGCTGATGTAGTAGCTGTCGAGGCCGTGCCGGTAGACCGAATTGATGCAAATCTAGTCCAGAAGGGTCTTCAAGACTTCACCCAGAAGCTGAACTCAGCCACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGGGTTGATGTCCATAGCGCTCTCAACTCTGCTCTTACAGGCTAA 594 0.5488 MLRRATSALLSGASRRRLSTDVPATPSADSGFAEAWKKVSPNIDPPQTPLAYMKPRPPTPSTLPSKLTVNFVLPYASQLAAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFISSGFAFIHANSVADVVAVEAVPVDRIDANLVQKGLQDFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02013 197 Gene3D - 154 196 - -
Pumo7g02013 197 Gene3D - 57 153 IPR036771 -
Pumo7g02013 197 FunFam ATP synthase delta 56 153 - -
Pumo7g02013 197 Coils Coil 162 182 - -
Pumo7g02013 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pumo7g02013 197 NCBIfam ATP synthase F1 subunit epsilon 78 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pumo7g02013 197 MobiDBLite consensus disorder prediction 1 29 - -
Pumo7g02013 197 MobiDBLite consensus disorder prediction 12 26 - -
Pumo7g02013 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 28 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pumo7g02013 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
Pumo7g02013 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pumo7g02013 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02013 1 197 Primary Pumps ATPases AT5G47030 70.707 1.71e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02013 K02134 - gmx:100780778 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g02013 7 54645928 54649281 Pumo7g02013 7 54645928 54649281 ECH