Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g02007 ATGAAGTGCTTTTACTATTTCAAAGACAAATCCAGGAACAGTAAGCAAAGGTCAGCACCTGAACTAAAAGAGCAAGGGAAACTTGAGTTTTCAGGGCCTGAAAGGGTCACCAAGTCTTCATGCTCATCTGCATCGCCTCGCGGTATACCTGAACTGTATGAGGAGAAGGGTCATAATTTGAGGGTCTTCTCCTTCACAGAGCTCAAGCGTGCAACGAGTGATTTCAGCAGGCTTCTTAAGATAGGAGAAGGTGGATTTGGAAGTGTGTTTAAAGGTTCAATCAAGCCTGTTGAAGGGAATGGGAATTCTGTTTTAGTTGCCATCAAAAGGCTTAACAAGGATGCATTACAGGGTCATAAGCAATGGTTAACTGAAGTTCAGTTTCTTGGTGTTGTGGAACACCCAAATCTTGTCAAGCTCATTGGATACTGTGCTTTGGATGATGAAAGAGGGATCCAGAGACTACTAGTGTATGAATACATGCCGAACAAAAGCTTAGAATTTCATCTTTTCAATAAAGCATATGATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTATCTTATCTTCATGAAGAATTAGAAATTCAGGTGATATATCGAGATTTTAAAGCTTCAAATGTATTACTGGATGAAAACTTTAAGCCAAAGCTTTCCGATTTTGGACTTGCTAGGGAGGGACCAGTAGCTGGTGATACTCATGTTTCAACTGCTGTTATGGGGACTTATGGTTATGCTGCTCCAGATTACATTGAGACAGGCCATCTCACTGCCAAGAGTGATGTGTGGAGTTTCGGTGTGGTGCTATATGAAATACTTACTGGCAGGCGTTCCATGGAAAGAAACAGGCCCAAAACGGAGAAGAAACTATTGGAGTGGGTGAAGCTTTACCCTCCTGATAGCAAAAGGTTTGACACGATAATGGATCCGCGACTTCAAGGAGAATATTCCCTCAATGGAGCACGAAAAATCGCCAAACTCGCAGATCATTGCCTGTGTAAGAGTGCGAAAGATCGGCCATCAATGAGTCAGGTGGTAGAGAGATTGAAGCAGATAATCCAAGATTCTGATGCAGATGATAAAAGTATTGAGGTATCTGAAAATGATCCAGTTGAAGCTGAAGAGAAGGCAAATCAATCAGGCTCTACAGAGTTATGGAAAAAGAGGATGGAACATCTTGCAAAACTTGGTGAAAGTGTGGAGAGTGCTAGTAGAAGAAGATTTATGATCCTTCAGAGAGCCAATGTGTCTACATAG 1278 0.4194 MKCFYYFKDKSRNSKQRSAPELKEQGKLEFSGPERVTKSSCSSASPRGIPELYEEKGHNLRVFSFTELKRATSDFSRLLKIGEGGFGSVFKGSIKPVEGNGNSVLVAIKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDDERGIQRLLVYEYMPNKSLEFHLFNKAYDPLPWKTRLEIALGAAQGLSYLHEELEIQVIYRDFKASNVLLDENFKPKLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEILTGRRSMERNRPKTEKKLLEWVKLYPPDSKRFDTIMDPRLQGEYSLNGARKIAKLADHCLCKSAKDRPSMSQVVERLKQIIQDSDADDKSIEVSENDPVEAEEKANQSGSTELWKKRMEHLAKLGESVESASRRRFMILQRANVST 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g02007 425 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Pumo7g02007 425 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Pumo7g02007 425 Gene3D Transferase(Phosphotransferase) domain 1 161 383 - -
Pumo7g02007 425 MobiDBLite consensus disorder prediction 11 48 - -
Pumo7g02007 425 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Pumo7g02007 425 FunFam PTI1-like tyrosine-protein kinase 3 161 370 - -
Pumo7g02007 425 MobiDBLite consensus disorder prediction 11 31 - -
Pumo7g02007 425 MobiDBLite consensus disorder prediction 364 381 - -
Pumo7g02007 425 MobiDBLite consensus disorder prediction 364 391 - -
Pumo7g02007 425 CDD STKc_IRAK 81 359 - -
Pumo7g02007 425 SUPERFAMILY Protein kinase-like (PK-like) 58 356 IPR011009 -
Pumo7g02007 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pumo7g02007 425 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g02007 425 PANTHER OS01G0588500 PROTEIN-RELATED 26 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g02007 Pumo-Chr7 54446970 54454591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g02007 1 393 Glycoside Hydrolase AT3G07070 41.587 3.42e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo7g02007 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g02007 - - gmx:100784625 794.267