Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01999 ATGAACAATATGGACGTTTCATGGACCTCTCATCATGGCTTAGATAGACCTATCAGGATATGTCCCAAAGTTGAAGAAAGAGTCTCAGGAAAAGATGTACTCACAAGAGTAACGTGTGACAAACAAAAGGACATTGCAAGTAAGCTACTGGCCAAGCTTGAAGCTCATAATCTCTCCATAGTGTGTACCAATGTTTTGCCTCTTGGGAATTCTGCTCTCAACTTTATCAGCATTGCTCAGGAACATTCTTCTCCATGCGGCGCAAGTTGGCAAGTTGATGATGTGACCATGCTGGAATCTTGGAGACAACCTTCGTGCAAGTTGGTGTTGTTGGAGTCTAGAGGAAATTTGCTCACTGATGCTTGGATTTGGATTACGGCCCAAGTTGTAACCTGTATTGGACATTGA 408 0.4314 MNNMDVSWTSHHGLDRPIRICPKVEERVSGKDVLTRVTCDKQKDIASKLLAKLEAHNLSIVCTNVLPLGNSALNFISIAQEHSSPCGASWQVDDVTMLESWRQPSCKLVLLESRGNLLTDAWIWITAQVVTCIGH 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01999 135 PANTHER BHLH TRANSCRIPTION FACTOR 20 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01999 Pumo-Chr7 53771769 53777261 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01999 22 69 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 50.000 8.60e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01999 - K03406 gmx:100783561 106.301