Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01998 ATGGATGAGTCATGGCAAAAATGGGTTTCCTTTTTGGAAACGAATTTATTCAGTGAATATCATGACATGAACTCTCTTGAAGAAGAATTGGAGGGAGAGAATTCAGTGGACCCTGCAGAACTCTCATGGGAAAATCTCTCTTCTTATTCACATCTCACTAAAGAAAGCACCACCCTTCTGGAAGAGAACACTGGCTTTGATATTACAAGTCTAAAACATCATGTTTCTCCAGAGAAACCAAAGTCTTGCATTCTGTCTTTTGAGGATTCCACTCCAGTGCCAATTATTCCCAAGAAAACATGCCAATGTCATGGTGAACATTCAAAGGAGACAAAAGAAAAACCACACAGTAGAAAACCCCTCAAGAGGGTTAGAACCTCTTCTCAGACAGTTAATCACATAATCGCTGAGAGAAAAAGGAGAGAGAATATCACCAGGATGTTCATACGTCTTTCAGCCCTTATTCCAGGATTGAAAAAGAAAAAGCACATGACTCCTAACTCACTTTAA 510 0.3941 MDESWQKWVSFLETNLFSEYHDMNSLEEELEGENSVDPAELSWENLSSYSHLTKESTTLLEENTGFDITSLKHHVSPEKPKSCILSFEDSTPVPIIPKKTCQCHGEHSKETKEKPHSRKPLKRVRTSSQTVNHIIAERKRRENITRMFIRLSALIPGLKKKKHMTPNSL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01998 169 PANTHER BHLH TRANSCRIPTION FACTOR 35 160 - -
Pumo7g01998 169 MobiDBLite consensus disorder prediction 103 128 - -
Pumo7g01998 169 MobiDBLite consensus disorder prediction 103 117 - -
Pumo7g01998 169 Gene3D - 120 168 IPR036638 GO:0046983
Pumo7g01998 169 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 169 IPR011598 GO:0046983
Pumo7g01998 169 Pfam Helix-loop-helix DNA-binding domain 131 162 IPR011598 GO:0046983
Pumo7g01998 169 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 162 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01998 Pumo-Chr7 53700259 53701842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01998 13 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 31.138 1.07e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pumo7g01998 HLH 4.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01998 - - gmx:100815351 229.95